RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 DENND1AQ8TEH3 1009 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 SMPDL3AQ92484 453 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 SLC22A18Q96BI1 424 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 RHBDF1Q96CC6 855 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 PCBD2Q9H0N5 130 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 SRMSQ9H3Y6 488 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 SLC32A1Q9H598 525 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 STOX2Q9P2F5 926 aaPredicted RBP12.11□□□□□ -0.47
COPB1-208ENST00000532088 EPHA6Q9UF33 1036 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 RAPGEFL1Q9UHV5 662 aa12.11□□□□□ -0.47
COPB1-208ENST00000532088 TNPO3Q9Y5L0 923 aaKnown RBP12.11□□□□□ -0.47
COPB1-208ENST00000532088 PRAMEF33A0A0G2JMD5 474 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 SERTM1A2A2V5 107 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 OR5K3A6NET4 321 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 SUPT3HB4E1H0 165 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 TM4SF5O14894 197 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 PRMT3O60678 531 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 SPAG7O75391 227 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 SUPT3HO75486 399 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 UBXN7O94888 489 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 CREB1P16220 341 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 ETV4P43268 484 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 PRKAA2P54646 552 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 KIR2DS3Q14952 304 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 PCBP2Q15366 365 aaKnown RBP eCLIP12.1□□□□□ -0.47
COPB1-208ENST00000532088 CCSMST1Q4G0I0 132 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 GUSBP11Q6P575 273 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 AGTRAPQ6RW13 159 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 EFL1Q7Z2Z2 1120 aaKnown RBP12.1□□□□□ -0.47
COPB1-208ENST00000532088 SPRED1Q7Z699 444 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 OOSP2Q86WS3 158 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 LRRC56Q8IYG6 542 aaPredicted RBP12.1□□□□□ -0.47
COPB1-208ENST00000532088 FBXO39Q8N4B4 442 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 OR10G6Q8NH81 332 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 IFI44Q8TCB0 444 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 ZNF480Q8WV37 535 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 CCDC74AQ96AQ1 378 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 CD180Q99467 661 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 EGFL8Q99944 293 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 SGPP1Q9BX95 441 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 C1QTNF3Q9BXJ4 246 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 UNKQ9C0B0 810 aaKnown RBP12.1□□□□□ -0.47
COPB1-208ENST00000532088 KCNK4Q9NYG8 393 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 UTP6Q9NYH9 597 aaKnown RBP12.1□□□□□ -0.47
COPB1-208ENST00000532088 CD274Q9NZQ7 290 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 COPG2Q9UBF2 871 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 DNAH14Q0VDD8 3507 aa12.1□□□□□ -0.47
COPB1-208ENST00000532088 IGHV1OR21-1A0A087WYE8 117 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 TMEM120BA0PK00 339 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 CPED1A4D0V7 1026 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 A8MT66 165 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 C2orf74A8MZ97 194 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 E7ENX8 843 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 UBXN8O00124 270 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 SLC30A4O14863 429 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 DUX1O43812 170 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 PRICKLE3O43900 615 aaPredicted RBP12.09□□□□□ -0.47
COPB1-208ENST00000532088 GUCA1CO95843 209 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 PROS1P07225 676 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 DHRS4L1P0CG22 281 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 MYL2P10916 166 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 GFAPP14136 432 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 CPA3P15088 417 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 AMD1P17707 334 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 RPA3P35244 121 aaPredicted RBP12.09□□□□□ -0.47
COPB1-208ENST00000532088 CAPZBP47756 277 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 SLC6A12P48065 614 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 ACADVLP49748 655 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 DNAJB13P59910 316 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 E2F1Q01094 437 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 TAP2Q03519 686 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 ASPHQ12797 758 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 PRKAA1Q13131 559 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 NAA25Q14CX7 972 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 CAPN13Q6MZZ7 669 aaPredicted RBP12.09□□□□□ -0.47
COPB1-208ENST00000532088 C16orf46Q6P387 395 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 WDR74Q6RFH5 385 aaPredicted RBP12.09□□□□□ -0.47
COPB1-208ENST00000532088 LRRC70Q7Z2Q7 622 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 SYTL1Q8IYJ3 562 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 ADGRF3Q8IZF5 1079 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 LINC01555Q8NAE3 123 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 OR4E2Q8NGC2 313 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 FAM111AQ96PZ2 611 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 MIPEPQ99797 713 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 TBC1D10AQ9BXI6 508 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 CAPS2Q9BXY5 557 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 CCDC177Q9NQR7 707 aaPredicted RBP12.09□□□□□ -0.47
COPB1-208ENST00000532088 WWOXQ9NZC7 414 aa12.09□□□□□ -0.47
COPB1-208ENST00000532088 ASCC3Q8N3C0 2202 aaKnown RBP12.09□□□□□ -0.47
COPB1-208ENST00000532088 A0A1W2PPV9 198 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 PIPSLA2A3N6 862 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 G3V2L1 256 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 BIRC5O15392 142 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 TAPBPO15533 448 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 B4GAT1O43505 415 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 STK16O75716 305 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 CCNDBP1O95273 360 aa12.08□□□□□ -0.48
COPB1-208ENST00000532088 CHRM5P08912 532 aaPredicted RBP12.08□□□□□ -0.48
COPB1-208ENST00000532088 CD1CP29017 333 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms