RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 GDF3Q9NR23 364 aa5.13□□□□□ -1.59
AMBRA1-209ENST00000529963 ARL8BQ9NVJ2 186 aa5.13□□□□□ -1.59
AMBRA1-209ENST00000529963 PTGFRNQ9P2B2 879 aa5.13□□□□□ -1.59
AMBRA1-209ENST00000529963 KLHL13Q9P2N7 655 aa5.13□□□□□ -1.59
AMBRA1-209ENST00000529963 ARMCX3Q9UH62 379 aaPredicted RBP5.13□□□□□ -1.59
AMBRA1-209ENST00000529963 CFAP46Q8IYW2 2715 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3DA0A087WVF3 549 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3IA0A087WXS9 549 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3EA0A087X179 549 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3KA0A087X1G2 549 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3FA6NER0 549 aaPredicted RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 B9A039 149 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3LB9A6J9 549 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 MUC22E2RYF6 1773 aaPredicted RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 PLK4O00444 970 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 HEXIM1O94992 359 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 LUC7L3O95232 432 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 LDOC1O95751 146 aaPredicted RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 APOEP02649 317 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 CHRM5P08912 532 aaPredicted RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3HP0C7X1 549 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 MATN1P21941 496 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 PTPRBP23467 1997 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 CD38P28907 300 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 GRK5P34947 590 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 IDUAP35475 653 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 NNMTP40261 264 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 PSMD8P48556 350 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 FOXL2P58012 376 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 RPS24P62847 133 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 NUCB2P80303 420 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 ECT2LQ008S8 904 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 LRRC63Q05C16 580 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 ELAVL3Q14576 367 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 KCNT1Q5JUK3 1230 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 C9orf64Q5T6V5 341 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3GQ6DHY5 549 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 NADSYN1Q6IA69 706 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3CQ6IPX1 549 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 PMF1Q6P1K2 205 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 CFAP161Q6P656 301 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 MARCH9Q86YJ5 346 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 MMAAQ8IVH4 418 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 TBC1D3Q8IZP1 549 aaPredicted RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 DQX1Q8TE96 717 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 SLC35F5Q8WV83 523 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 SNRNP27Q8WVK2 155 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 RSC1A1Q92681 617 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 FAM149B1Q96BN6 582 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 SERAC1Q96JX3 654 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 LMLNQ96KR4 655 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 PRICKLE1Q96MT3 831 aaPredicted RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 GSDMAQ96QA5 445 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 QTRT1Q9BXR0 403 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 NEUROG2Q9H2A3 272 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 GOLPH3LQ9H4A5 285 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 MLXIPLQ9NP71 852 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 LIN7CQ9NUP9 197 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 GAR1Q9NY12 217 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 INTS6Q9UL03 887 aaKnown RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 C19orf53Q9UNZ5 99 aaPredicted RBP5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 ERVW-1Q9UQF0 538 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 RCE1Q9Y256 329 aa5.12□□□□□ -1.59
AMBRA1-209ENST00000529963 AHCTF1Q8WYP5 2266 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 A0A1W2PR77 199 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 A6NLC8 198 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 PRSS47A8MTI9 375 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 TTC34A8MYJ7 566 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 TLR4O00206 839 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 PSMA7O14818 248 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 RRP8O43159 456 aaKnown RBP5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 MAGEC1O60732 1142 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 SMC2O95347 1197 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 MOCS2O96007 188 aaPredicted RBP5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 IL1BP01584 269 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 WNT1P04628 370 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 GOT1P17174 413 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 EPHA8P29322 1005 aaPredicted RBP5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 SERPINA4P29622 427 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 NUDT1P36639 197 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 PRCPP42785 496 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 ACADSBP45954 432 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 FMO5P49326 533 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 ACADVLP49748 655 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 CSRP3P50461 194 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 ADPRHP54922 357 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 VAMP2P63027 116 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 SULT2A1Q06520 285 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 OVGP1Q12889 678 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 ILKQ13418 452 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 PNOCQ13519 176 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 STIM1Q13586 685 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 SLC12A1Q13621 1099 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 CCDC40Q4G0X9 1142 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 DCAF6Q58WW2 860 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 MS4A13Q5J8X5 152 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 HES3Q5TGS1 186 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 ZNF658Q5TYW1 1059 aaPredicted RBP5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 NAPEPLDQ6IQ20 393 aa5.11□□□□□ -1.59
AMBRA1-209ENST00000529963 WDR93Q6P2C0 686 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms