RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 NAPRTQ6XQN6 538 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PRSS42Q7Z5A4 293 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 EXOC3L1Q86VI1 746 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TMPRSS12Q86WS5 348 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CYP4X1Q8N118 509 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PNPLA1Q8N8W4 532 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 LMNTD1Q8N9Z9 388 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TCP10LQ8TDR4 215 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 ZNF480Q8WV37 535 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 NCSTNQ92542 709 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TLCD1Q96CP7 247 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 L3HYPDHQ96EM0 354 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TCTN2Q96GX1 697 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CNDP1Q96KN2 507 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CMKLR1Q99788 373 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CCT7Q99832 543 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 AIF1LQ9BQI0 150 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CENPKQ9BS16 269 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 ZPBPQ9BS86 351 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 EFCAB11Q9BUY7 163 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 C1QTNF3Q9BXJ4 246 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 CD244Q9BZW8 370 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 B3GNT4Q9C0J1 378 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 SEMA6CQ9H3T2 930 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 SYNDIG1Q9H7V2 258 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PELI2Q9HAT8 420 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PDE7BQ9NP56 450 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 TMEM184CQ9NVA4 438 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 NMRK1Q9NWW6 199 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 ACTR10Q9NZ32 417 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 COPG2Q9UBF2 871 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 PTBP2Q9UKA9 531 aaKnown RBP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 POMT2Q9UKY4 750 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 ICKQ9UPZ9 632 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 MN1Q10571 1320 aaPredicted RBP7.67□□□□□ -1.18
SSBP3-211ENST00000528787 GPR179Q6PRD1 2367 aa7.67□□□□□ -1.18
SSBP3-211ENST00000528787 A0A088AWK7 358 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TMEM120BA0PK00 339 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 NCF1BA6NI72 391 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 NCF1CA8MVU1 366 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 D6RAR5 112 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 CAPN5O15484 640 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TYROBPO43914 113 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 CCNT2O60583 730 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 SRPX2O60687 465 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 CRCPO75575 148 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 WDR47O94967 919 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 EML2O95834 649 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 C9P02748 559 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PROCP04070 461 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 HBQ1P09105 142 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 NCF1P14598 390 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 ZNF10P21506 573 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 IMPA1P29218 277 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PRDX3P30048 256 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 CCKBRP32239 447 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 ARL1P40616 181 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 CCR8P51685 355 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 INHBCP55103 352 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PKNOX1P55347 436 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 RAB15P59190 212 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 RPS15AP62244 130 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PPP2R2AP63151 447 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 HSD11B2P80365 405 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 IRF9Q00978 393 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PCDH1Q08174 1060 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TGM3Q08188 693 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 GALNT1Q10472 559 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 NAE1Q13564 534 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TSTA3Q13630 321 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 OR4D1Q15615 310 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TBCCQ15814 346 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PHKG1Q16816 387 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PTCHD3Q3KNS1 767 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 AMZ1Q400G9 498 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 TCTE1Q5JU00 501 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 MANEAQ5SRI9 462 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 UBAP2Q5T6F2 1119 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 YOD1Q5VVQ6 348 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 LIPJQ5W064 366 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 ICE2Q659A1 982 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 IRGCQ6NXR0 463 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 SH2D5Q6ZV89 423 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 THOC6Q86W42 341 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 NUDCD3Q8IVD9 361 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 Q8N9G6 341 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 SNX31Q8N9S9 440 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 AGBL5Q8NDL9 886 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 C7orf57Q8NEG2 295 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 DEFB124Q8NES8 71 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 OR2I1PQ8NGU4 316 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 NAT14Q8WUY8 206 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PATE1Q8WXA2 126 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 EXT2Q93063 718 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 RERGQ96A58 199 aaPredicted RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PTERQ96BW5 349 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 PTCD3Q96EY7 689 aaKnown RBP7.66□□□□□ -1.18
SSBP3-211ENST00000528787 GPR78Q96P69 363 aa7.66□□□□□ -1.18
SSBP3-211ENST00000528787 FCRL4Q96PJ5 515 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms