RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 FAM221BA6H8Z2 402 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GIPC1O14908 333 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 BIRC5O15392 142 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PRICKLE3O43900 615 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCNT2O60583 730 aaKnown RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 TRIM13O60858 407 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 STK16O75716 305 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 UBXN7O94888 489 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 FAM107AO95990 144 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PROS1P07225 676 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 FGF3P11487 239 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PNLIPP16233 465 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CKMT2P17540 419 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 POLR2CP19387 275 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 IMPDH1P20839 514 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PSMB5P28074 263 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ID4P47928 161 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 EPHA4P54764 986 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NAGLUP54802 743 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 DNAJB13P59910 316 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 HERVK_113P63132 956 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 UNC50Q53HI1 259 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ZNF678Q5SXM1 525 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NKAIN2Q5VXU1 208 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 LIPMQ5VYY2 423 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CES4AQ5XG92 561 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SPRED1Q7Z699 444 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 THOC6Q86W42 341 aaKnown RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 OR6Y1Q8NGX8 325 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NAT6Q93015 286 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCDC126Q96EE4 140 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 L3HYPDHQ96EM0 354 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NSUN5Q96P11 429 aaKnown RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GATA5Q9BWX5 397 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ERVK-6Q9BXR3 956 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PITPNM3Q9BZ71 974 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCDC177Q9NQR7 707 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 HRASLS2Q9NWW9 162 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 FTSJ1Q9UET6 329 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PCTPQ9UKL6 214 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PRDM4Q9UKN5 801 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SLC22A14Q9Y267 594 aa11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 TNPO3Q9Y5L0 923 aaKnown RBP11.75□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ASXL3Q9C0F0 2248 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 OR5K3A6NET4 321 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ZNF839A8K0R7 811 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 K7EPI3 171 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 E2F3O00716 465 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 WDR47O94967 919 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 RPS17P08708 135 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 NPPBP16860 134 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 EPORP19235 508 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 BGNP21810 368 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CD1CP29017 333 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 DUSP3P51452 185 aaPredicted RBP11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PPP1CAP62136 330 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 YBX1P67809 324 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CAPN13Q6MZZ7 669 aaPredicted RBP11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ZCCHC23Q6ZST2 131 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 RAB44Q7Z6P3 723 aaPredicted RBP11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCNYL1Q8N7R7 359 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 DEFB124Q8NES8 71 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 OR2A1Q8NGT9 310 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 FLVCR1-AS1Q8TAF5 88 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 IFI44Q8TCB0 444 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ZNF483Q8TF39 744 aaPredicted RBP11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCT8L2Q96SF2 557 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCDC3Q9BQI4 270 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 RTKNQ9BST9 563 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ACAT2Q9BWD1 397 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 C1QTNF3Q9BXJ4 246 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SLC32A1Q9H598 525 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 INTS9Q9NV88 658 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 OPTCQ9UBM4 332 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SH2B3Q9UQQ2 575 aa11.74□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PIPSLA2A3N6 862 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ISM1B1AKI9 464 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 SUPT7LO94864 414 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 AMD1P17707 334 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 TSPAN8P19075 237 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ACP1P24666 158 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCR10P46092 362 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CAPZBP47756 277 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CDH13P55290 713 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CCL7P80098 99 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 CFHR1Q03591 330 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 AMZ1Q400G9 498 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 THEMIS2Q5TEJ8 643 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 PRAMEF13Q5VWM6 474 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 TTC19Q6DKK2 380 aaPredicted RBP11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 LRRC70Q7Z2Q7 622 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 OOSP2Q86WS3 158 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 FAM20CQ8IXL6 584 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 TEX9Q8N6V9 391 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 OR2A14Q96R47 310 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 GSTO2Q9H4Y5 243 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ZBTB26Q9HCK0 441 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 DNAJC11Q9NVH1 559 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 ACTR10Q9NZ32 417 aa11.73□□□□□ -0.53
TRAF3IP2-211ENST00000528599 TAC3Q9UHF0 121 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms