RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 SYTL1Q8IYJ3 562 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 OR2L3Q8NG85 312 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 THAP4Q8WY91 577 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 PWWP2AQ96N64 755 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 PKP4Q99569 1192 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 DHRS4Q9BTZ2 278 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 PLAC1Q9HBJ0 212 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 PPANQ9NQ55 473 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 STARD5Q9NSY2 213 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 TRMT6Q9UJA5 497 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 CHMP2BQ9UQN3 213 aa11.64□□□□□ -0.55
TRAPPC4-209ENST00000528230 MDC1Q14676 2089 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 CAPN1P07384 714 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 F7P08709 466 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 FURINP09958 794 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 CMPK1P30085 196 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 GCGRP47871 477 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 PNLIPRP1P54315 467 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 TIAL1Q01085 375 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 ILF2Q12905 390 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 PDIA2Q13087 525 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 CALCOCO2Q13137 446 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 KCNAB2Q13303 367 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 FASTKQ14296 549 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 DEFB110Q30KQ9 67 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 HP1BP3Q5SSJ5 553 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 LCN10Q6JVE6 187 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZNF572Q7Z3I7 529 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 CPNE9Q8IYJ1 553 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 C17orf53Q8N3J3 647 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 DLG3Q92796 817 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 CFAP36Q96G28 342 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZNF285Q96NJ3 590 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 RUFY1Q96T51 708 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 WDR83Q9BRX9 315 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 NDC1Q9BTX1 674 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 SLC25A18Q9H1K4 315 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 MOCS1Q9NZB8 636 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 ANKMY1Q9P2S6 941 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 TSR3Q9UJK0 312 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 KLHL20Q9Y2M5 609 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 VWA7Q9Y334 891 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 KCNMB2Q9Y691 235 aa11.63□□□□□ -0.55
TRAPPC4-209ENST00000528230 ATMQ13315 3056 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 CDC14CA4D256 554 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 KRT87PA6NCN2 255 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 C9J4A7 227 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 E7ENX8 843 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 EIF3HO15372 352 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 SLC16A5O15375 505 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 RAD51CO43502 376 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 CCNDBP1O95273 360 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 SLC16A8O95907 504 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 ONECUT2O95948 504 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 C8GP07360 202 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 MCM3P25205 808 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 RPA3P35244 121 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 DCDP81605 110 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 TAP2Q03519 686 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 RELAQ04206 551 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 PRDX1Q06830 199 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 MGAT5Q09328 741 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 COL9A2Q14055 689 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 GRM7Q14831 915 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 NCF4Q15080 339 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 FAM214AQ32MH5 1076 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 PTCHD3Q3KNS1 767 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 RBM20Q5T481 1227 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 ATP1A1-AS1Q5TC04 95 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 DUPD1Q68J44 220 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 TRMT10BQ6PF06 316 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 PAQR3Q6TCH7 311 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 FAM198BQ6UWH4 519 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 UBE2R2Q712K3 238 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZNF605Q86T29 641 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 ANKMY2Q8IV38 441 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 APLFQ8IW19 511 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 PALM2Q8IXS6 379 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZNF655Q8N720 491 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 ENDOVQ8N8Q3 282 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 FBXO36Q8NEA4 188 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 MCOLN3Q8TDD5 553 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 ZNF480Q8WV37 535 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 EEF1AKMT1Q8WVE0 214 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 GBP5Q96PP8 586 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 NDNQ99608 321 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 MIPEPQ99797 713 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 TXLNGQ9NUQ3 528 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 IRAK4Q9NWZ3 460 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 NSMCE4AQ9NXX6 385 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 UTP6Q9NYH9 597 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 TCFL5Q9UL49 500 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 SNX7Q9UNH6 387 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 PADI2Q9Y2J8 665 aa11.62□□□□□ -0.55
TRAPPC4-209ENST00000528230 OR2A25A4D2G3 310 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 FITM1A5D6W6 292 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 CTSVO60911 334 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 CTSBP07858 339 aa11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 PIM1P11309 404 aaPredicted RBP11.61□□□□□ -0.55
TRAPPC4-209ENST00000528230 FDXRP22570 491 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms