RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 GFYI3L273 518 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 ZBTB14O43829 449 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 SRPX2O60687 465 aaPredicted RBP19.8■□□□□ 0.76
VPS28-206ENST00000526734 CAPN1P07384 714 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 FURINP09958 794 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 ERVK-10P10266 1014 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 ELK3P41970 407 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 RPS18P62269 152 aaKnown RBP19.8■□□□□ 0.76
VPS28-206ENST00000526734 DCDP81605 110 aaKnown RBP19.8■□□□□ 0.76
VPS28-206ENST00000526734 ILF2Q12905 390 aaKnown RBP19.8■□□□□ 0.76
VPS28-206ENST00000526734 CBLBQ13191 982 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 GRM7Q14831 915 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 STEAP4Q687X5 459 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 FCRL6Q6DN72 434 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 MAATS1Q7Z4T9 603 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 ZNF655Q8N720 491 aaPredicted RBP19.8■□□□□ 0.76
VPS28-206ENST00000526734 ZNF285Q96NJ3 590 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 GBP5Q96PP8 586 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 SLC30A3Q99726 388 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 MIPEPQ99797 713 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 GPN3Q9UHW5 284 aaPredicted RBP19.8■□□□□ 0.76
VPS28-206ENST00000526734 TEX264Q9Y6I9 313 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.8■□□□□ 0.76
VPS28-206ENST00000526734 SPTA1P02549 2419 aa19.8■□□□□ 0.76
VPS28-206ENST00000526734 ZNF462Q96JM2 2506 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 A0A1W2PPV9 198 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 HCRTR1O43613 425 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 BANF1O75531 89 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 PIM1P11309 404 aaPredicted RBP19.79■□□□□ 0.76
VPS28-206ENST00000526734 RPA3P35244 121 aaPredicted RBP19.79■□□□□ 0.76
VPS28-206ENST00000526734 GCGRP47871 477 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 PNLIPRP1P54315 467 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 ETF1P62495 437 aaKnown RBP19.79■□□□□ 0.76
VPS28-206ENST00000526734 SP140Q13342 867 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 CUL1Q13616 776 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 RAB43Q86YS6 212 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 FAM20CQ8IXL6 584 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 TTC29Q8NA56 475 aaPredicted RBP19.79■□□□□ 0.76
VPS28-206ENST00000526734 IP6K3Q96PC2 410 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 KRT12Q99456 494 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 SELENOSQ9BQE4 189 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 NDOR1Q9UHB4 597 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 CHMP2BQ9UQN3 213 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 KLHL20Q9Y2M5 609 aa19.79■□□□□ 0.76
VPS28-206ENST00000526734 A0A1B0GX78 115 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 FANCGO15287 622 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 C8GP07360 202 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 CASQ1P31415 396 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 CARSP49589 748 aaKnown RBP19.78■□□□□ 0.76
VPS28-206ENST00000526734 ABATP80404 500 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 IL10RAQ13651 578 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 FAM214AQ32MH5 1076 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 LACTB2Q53H82 288 aaPredicted RBP19.78■□□□□ 0.76
VPS28-206ENST00000526734 LCN10Q6JVE6 187 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 CYHR1Q6ZMK1 362 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 RNF44Q7L0R7 432 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 IGDCC3Q8IVU1 814 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 CPNE9Q8IYJ1 553 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 ADAMTS17Q8TE56 1095 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 FKBP10Q96AY3 582 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 PKP4Q99569 1192 aa19.78■□□□□ 0.76
VPS28-206ENST00000526734 PPANQ9NQ55 473 aaKnown RBP19.78■□□□□ 0.76
VPS28-206ENST00000526734 IFT80Q9P2H3 777 aaPredicted RBP19.78■□□□□ 0.76
VPS28-206ENST00000526734 TLN1Q9Y490 2541 aaKnown RBP19.77■□□□□ 0.76
VPS28-206ENST00000526734 OR2A25A4D2G3 310 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 FITM1A5D6W6 292 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 E7ESA3 106 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 J3QKU1 62 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 SLC28A2O43868 658 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 SLC16A8O95907 504 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 PSMB5P28074 263 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 RELAQ04206 551 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 CALCOCO2Q13137 446 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 NKAIN1Q4KMZ8 207 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 TEDDM1Q5T9Z0 273 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 TCTN3Q6NUS6 607 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 ATG14Q6ZNE5 492 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 UBE2R2Q712K3 238 aaPredicted RBP19.77■□□□□ 0.76
VPS28-206ENST00000526734 PALM2Q8IXS6 379 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 MYO1HQ8N1T3 1032 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 SPATA4Q8NEY3 305 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 MCOLN3Q8TDD5 553 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 CFAP36Q96G28 342 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 ABHD17AQ96GS6 310 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 TRIM31Q9BZY9 425 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 MRPS30Q9NP92 439 aaKnown RBP19.77■□□□□ 0.76
VPS28-206ENST00000526734 DHCR7Q9UBM7 475 aaKnown RBP19.77■□□□□ 0.76
VPS28-206ENST00000526734 ANAPC2Q9UJX6 822 aa19.77■□□□□ 0.76
VPS28-206ENST00000526734 KRT87PA6NCN2 255 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 DSCR3O14972 297 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 SLC16A5O15375 505 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 ONECUT2O95948 504 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 IGHEP01854 428 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 AHSGP02765 367 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 F7P08709 466 aaPredicted RBP19.76■□□□□ 0.75
VPS28-206ENST00000526734 MCM3P25205 808 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 GABRB3P28472 473 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 RRADP55042 308 aa19.76■□□□□ 0.75
VPS28-206ENST00000526734 FASTKQ14296 549 aaKnown RBP19.76■□□□□ 0.75
VPS28-206ENST00000526734 C1orf189Q5VU69 101 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms