RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 LAS2Q8IYD9 372 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TDRD5Q8NAT2 981 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 BCAS4Q8TDM0 211 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 DDI1Q8WTU0 396 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 DEPDC1BQ8WUY9 529 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MAIP1Q8WWC4 291 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ASB12Q8WXK4 309 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 NPIPB3Q92617 1050 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PIGKQ92643 395 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 FGF14Q92915 247 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 IGSF8Q969P0 613 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TBC1D31Q96DN5 1066 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ZFYVE19Q96K21 471 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RPRD1AQ96P16 312 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 RNF157Q96PX1 679 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PSMB7Q99436 277 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 PRMT1Q99873 361 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 KXD1Q9BQD3 176 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TMEM79Q9BSE2 394 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RPP25Q9BUL9 199 aaKnown RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 TUBB2BQ9BVA1 445 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ELOVL1Q9BW60 279 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 HEMGNQ9BXL5 484 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 OSBPL8Q9BZF1 889 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TRIM2Q9C040 744 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 ZYG11BQ9C0D3 744 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 CARD9Q9H257 536 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 TP63Q9H3D4 680 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 CATSPERBQ9H7T0 1116 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 OBP2BQ9NPH6 170 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 SPHK2Q9NRA0 654 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MRGBPQ9NV56 204 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MPP6Q9NZW5 540 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RCOR3Q9P2K3 495 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 THEGQ9P2T0 379 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 RNF14Q9UBS8 474 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 NFU1Q9UMS0 254 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 SNX12Q9UMY4 172 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MAGED1Q9Y5V3 778 aaPredicted RBP4.48□□□□□ -1.69
USP48-211ENST00000526044 MYO10Q9HD67 2058 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 CHD7Q9P2D1 2997 aa4.48□□□□□ -1.69
USP48-211ENST00000526044 MYOFQ9NZM1 2061 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TRIOBPQ9H2D6 2365 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 NUP205Q92621 2012 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 IGLV3-10A0A075B6K4 115 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 C3orf70A6NLC5 250 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 AQP12BA6NM10 295 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ZNF487B1APH4 448 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 LOC730098B7Z3J9 87 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 H0Y626 953 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 CHADO15335 359 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 DNPH1O43598 174 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ASNA1O43681 348 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 CST8O60676 142 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TBL1XO60907 577 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 CLDN11O75508 207 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 SKAP2O75563 359 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 CNTN5O94779 1100 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 NFATC1O95644 943 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TOP3BO95985 862 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 ERCC2P18074 760 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 FCARP24071 287 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 OR1E1P30953 314 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 HOXC13P31276 330 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 IDUAP35475 653 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 CDKN2BP42772 138 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 PAFAH1B1P43034 410 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 CDH4P55283 916 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 RPS24P62847 133 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 MPP1Q00013 466 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ID2Q02363 134 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 GAD2Q05329 585 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 FCHO2Q0JRZ9 810 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 WASHC5Q12768 1159 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ZNF177Q13360 481 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 HTR4Q13639 388 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 RUNX3Q13761 415 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TAZQ16635 292 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ITPRIPL2Q3MIP1 535 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 AADACL2Q6P093 401 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 WDR93Q6P2C0 686 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 TMCO3Q6UWJ1 677 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 DEF8Q6ZN54 512 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 RBM44Q6ZP01 1051 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 BZW1Q7L1Q6 419 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 GALNT5Q7Z7M9 940 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 VSIG1Q86XK7 387 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 SLC13A5Q86YT5 568 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 ADHFE1Q8IWW8 467 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 FAM217AQ8IXS0 508 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 ZNF683Q8IZ20 524 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 RASGEF1CQ8N431 466 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 CARNMT1Q8N4J0 409 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 RTL3Q8N8U3 475 aaKnown RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 ZNF557Q8N988 423 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 HJURPQ8NCD3 748 aaPredicted RBP4.47□□□□□ -1.69
USP48-211ENST00000526044 NAXEQ8NCW5 288 aa4.47□□□□□ -1.69
USP48-211ENST00000526044 SRFBP1Q8NEF9 429 aaKnown RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms