RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 MCM3P25205 808 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 GRIA3P42263 894 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 GCGRP47871 477 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 PNLIPRP1P54315 467 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 CDKN2DP55273 166 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 CDC20Q12834 499 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 TCTE1Q5JU00 501 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 RBM20Q5T481 1227 aaKnown RBP20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 HECTD2Q5U5R9 776 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 PAQR3Q6TCH7 311 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 ZC3HC1Q86WB0 502 aaKnown RBP20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 PALM2Q8IXS6 379 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 MNS1Q8NEH6 495 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 MCOLN3Q8TDD5 553 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 CT55Q8WUE5 264 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 ZNF480Q8WV37 535 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 PKP4Q99569 1192 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 PCMTD2Q9NV79 361 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 EURLQ9NYK6 297 aa20.08■□□□□ 0.81
TRAPPC9-215ENST00000524162 E7ENX8 843 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 ZSCAN9O15535 394 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 ZNF749O43361 778 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 CCNDBP1O95273 360 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 TSPAN12O95859 305 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 F7P08709 466 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 CD63P08962 238 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 CMPK1P30085 196 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 IL2P60568 153 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 RPS15P62841 145 aaKnown RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 ABATP80404 500 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 MRPS25P82663 173 aaKnown RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 TAP2Q03519 686 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 TBR1Q16650 682 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 TAF1BQ53T94 588 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 ZNF385CQ66K41 422 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 FCRL6Q6DN72 434 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 C8orf74Q6P047 294 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 BORAQ6PGQ7 559 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 UBE2R2Q712K3 238 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 PIWIL4Q7Z3Z4 852 aaKnown RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 LRRC56Q8IYG6 542 aaPredicted RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 MYO1HQ8N1T3 1032 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 MMGT1Q8N4V1 131 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 FBXO25Q8TCJ0 367 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 EEF1AKMT1Q8WVE0 214 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 CDKL2Q92772 493 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 CLIP3Q96DZ5 547 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 MED8Q96G25 268 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 CCDC138Q96M89 665 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 DHRS4Q9BTZ2 278 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 NLNQ9BYT8 704 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 ADNPQ9H2P0 1102 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 RHOJQ9H4E5 214 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 PARVBQ9HBI1 364 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 SAYSD1Q9NPB0 183 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 UTP6Q9NYH9 597 aaKnown RBP20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 CIDEBQ9UHD4 219 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 TUBD1Q9UJT1 453 aa20.07■□□□□ 0.8
TRAPPC9-215ENST00000524162 OR2A25A4D2G3 310 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 CREG1O75629 220 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 ONECUT2O95948 504 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 PTPN4P29074 926 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 ARSFP54793 590 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 PLTPP55058 493 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 PRDX1Q06830 199 aaKnown RBP20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 PDAP1Q13442 181 aaKnown RBP20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 LINC00303Q3SY05 128 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 ZDHHC24Q6UX98 284 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 STRA8Q7Z7C7 330 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 SYVN1Q86TM6 617 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 MCATQ8IVS2 390 aaKnown RBP20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 SYTL1Q8IYJ3 562 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 C2orf73Q8N5S3 287 aaPredicted RBP20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 DLG3Q92796 817 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 MR1Q95460 341 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 PCBD2Q9H0N5 130 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 POPDC3Q9HBV1 291 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 CCDC88CQ9P219 2028 aa20.06■□□□□ 0.8
TRAPPC9-215ENST00000524162 FITM1A5D6W6 292 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 NKX2-8O15522 239 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 HCRTR1O43613 425 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 ENO2P09104 434 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 AGXTP21549 392 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 CCND1P24385 295 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 HRH2P25021 359 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 RPA3P35244 121 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 AP1S2P56377 157 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 FASTKQ14296 549 aaKnown RBP20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 GLE1Q53GS7 698 aaKnown RBP20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 CEP128Q6ZU80 1094 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 RNF44Q7L0R7 432 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 TAX1BP1Q86VP1 789 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 GPATCH11Q8N954 259 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 SLC7A5P2Q9GIP4 190 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 CHST8Q9H2A9 424 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 AKIRIN1Q9H9L7 192 aaPredicted RBP20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 SLC17A6Q9P2U8 582 aa20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 NOVA2Q9UNW9 492 aaKnown RBP20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 FARSAQ9Y285 508 aaKnown RBP20.05■□□□□ 0.8
TRAPPC9-215ENST00000524162 PSAT1Q9Y617 370 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms