RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 KLHDC9Q8NEP7 349 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 OR10V1Q8NGI7 309 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 SLC26A7Q8TE54 656 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 SUSD6Q92537 303 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 NSMAFQ92636 917 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 VMP1Q96GC9 406 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 FAM71F1Q96KD3 344 aaPredicted RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 NODALQ96S42 347 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 INPP5KQ9BT40 448 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 PITPNM3Q9BZ71 974 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 SDR39U1Q9NRG7 319 aaPredicted RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 FAM207AQ9NSI2 230 aaPredicted RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 ZNF701Q9NV72 531 aaPredicted RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 ARGLU1Q9NWB6 273 aaPredicted RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 C19orf25Q9UFG5 118 aaPredicted RBP3.59□□□□□ -1.83
SKP1-212ENST00000523966 STUB1Q9UNE7 303 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 TCF19Q9Y242 345 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 RIPK3Q9Y572 518 aa3.59□□□□□ -1.83
SKP1-212ENST00000523966 EPHB6O15197 1021 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 STX6O43752 255 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 SPP1P10451 314 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 GLULP15104 373 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 CASTP20810 708 aaKnown RBP3.58□□□□□ -1.84
SKP1-212ENST00000523966 ANOS1P23352 680 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 ITGA3P26006 1051 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 DCTP40126 519 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 CETN2P41208 172 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 WNT5AP41221 380 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 TNNT3P45378 269 aaPredicted RBP3.58□□□□□ -1.84
SKP1-212ENST00000523966 MTCP1P56278 107 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 NONOQ15233 471 aaKnown RBP eCLIP3.58□□□□□ -1.843e-7■■■□□ 16.4
SKP1-212ENST00000523966 FAM174BQ3ZCQ3 159 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 LCN1P1Q5VSP4 162 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 ARHGEF16Q5VV41 709 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 SH2D5Q6ZV89 423 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 NRARPQ7Z6K4 114 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 CIARTQ8N365 385 aaPredicted RBP3.58□□□□□ -1.84
SKP1-212ENST00000523966 HEXDCQ8WVB3 486 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 PIGBQ92521 554 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 EXOC4Q96A65 974 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 FAM20AQ96MK3 541 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 JAKMIP1Q96N16 626 aaKnown RBP3.58□□□□□ -1.84
SKP1-212ENST00000523966 SLC2A11Q9BYW1 496 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 P4HTMQ9NXG6 502 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 ERAP1Q9NZ08 941 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.58□□□□□ -1.84
SKP1-212ENST00000523966 KCNJ14Q9UNX9 436 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 TNNQ9UQP3 1299 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 CHKBQ9Y259 395 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 WDR83OSQ9Y284 106 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 C2CD2Q9Y426 696 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 CFTRP13569 1480 aa3.58□□□□□ -1.84
SKP1-212ENST00000523966 TRIP12Q14669 1992 aaPredicted RBP3.58□□□□□ -1.84
SKP1-212ENST00000523966 PMS2P5A8MQ11 134 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 IFIT3O14879 490 aaKnown RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 GSRP00390 522 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 TSHBP01222 138 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 RLN1P04808 185 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 STAG3L1P0CL83 205 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 TLX1P31314 330 aaPredicted RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 RGS7P49802 495 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 VAMP7P51809 220 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 IRX6P78412 446 aaPredicted RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 TAF10Q12962 218 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 GPR17Q13304 367 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 RBBP7Q16576 425 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 UGP2Q16851 508 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 KIAA1644Q3SXP7 199 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 OR4A47Q6IF82 309 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 CASC4Q6P4E1 433 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 CTR9Q6PD62 1173 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 G2E3Q7L622 706 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 FAM219AQ8IW50 185 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 MMD2Q8IY49 270 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 ANKRD13CQ8N6S4 541 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 MAPKAPK5-AS1Q8N8E1 139 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 CCDC63Q8NA47 563 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 KBTBD8Q8NFY9 601 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 OR52N5Q8NH56 324 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 TSACCQ96A04 125 aaPredicted RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 FBXO17Q96EF6 278 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 BSCL2Q96G97 398 aaPredicted RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 AK8Q96MA6 479 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 CPVLQ9H3G5 476 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 RNF121Q9H920 327 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 COPS7BQ9H9Q2 264 aaPredicted RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 DNAJC4Q9NNZ3 241 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 CHCHD3Q9NX63 227 aaKnown RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 DDX43Q9NXZ2 648 aaKnown RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 PKD2L2Q9NZM6 624 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 VPS18Q9P253 973 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 ARMCX3Q9UH62 379 aaPredicted RBP3.57□□□□□ -1.84
SKP1-212ENST00000523966 GRID1Q9ULK0 1009 aa3.57□□□□□ -1.84
SKP1-212ENST00000523966 WRNQ14191 1432 aaPredicted RBP eCLIP3.56□□□□□ -1.843e-11■■■□□ 19.1
SKP1-212ENST00000523966 EEA1Q15075 1411 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 STK36Q9NRP7 1315 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 IGHV4-61A0A0C4DH41 118 aa3.56□□□□□ -1.84
SKP1-212ENST00000523966 IFITM10A6NMD0 228 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms