RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 CCDC88CQ9P219 2028 aa16.09■□□□□ 0.17
SPIDR-221ENST00000523814 SHANK1Q9Y566 2161 aa16.09■□□□□ 0.17
SPIDR-221ENST00000523814 A0A1W2PPV9 198 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 TCRBV7S3A2A0A539 114 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 H3BMM5 538 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 MASP2O00187 686 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 PFDN6O15212 129 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 CEP104O60308 925 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 ESR1P03372 595 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 MAGEA6P43360 314 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 BDKRB1P46663 353 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 AIMP2Q13155 320 aaKnown RBP16.08■□□□□ 0.16
SPIDR-221ENST00000523814 CRB2Q5IJ48 1285 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 WASHC2DQ5SRD0 308 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 COX15Q7KZN9 410 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 IQCKQ8N0W5 287 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 PRELID2Q8N945 189 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 TTC29Q8NA56 475 aaPredicted RBP16.08■□□□□ 0.16
SPIDR-221ENST00000523814 TRIM58Q8NG06 486 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 OR2L3Q8NG85 312 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.08■□□□□ 0.16
SPIDR-221ENST00000523814 SNRNP40Q96DI7 357 aaKnown RBP16.08■□□□□ 0.16
SPIDR-221ENST00000523814 C19orf60Q96EN9 201 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 SPSB2Q99619 263 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 SLC29A3Q9BZD2 475 aa16.08■□□□□ 0.16
SPIDR-221ENST00000523814 CUEDC1Q9NWM3 386 aaPredicted RBP16.08■□□□□ 0.16
SPIDR-221ENST00000523814 RUVBL2Q9Y230 463 aaKnown RBP16.08■□□□□ 0.16
SPIDR-221ENST00000523814 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-221ENST00000523814 HYKKA2RU49 373 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 VSTM2BA6NLU5 285 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 GOLGA8KD6RF30 607 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 GOLGA8TH3BQL2 631 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 SOCS6O14544 535 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 NIPSNAP2O75323 286 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 SEMA7AO75326 666 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 PSMB5P28074 263 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 OR1D4P47884 311 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 VSX2P58304 361 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-221ENST00000523814 SARNPP82979 210 aaKnown RBP16.07■□□□□ 0.16
SPIDR-221ENST00000523814 KIAA0930Q6ICG6 404 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-221ENST00000523814 FBXO42Q6P3S6 717 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 CNSTQ6PJW8 725 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 KIRREL2Q6UWL6 708 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 ZADH2Q8N4Q0 377 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 OTUD6BQ8N6M0 293 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 TM9SF4Q92544 642 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 MIPEPQ99797 713 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 ZBTB20Q9HC78 741 aaPredicted RBP16.07■□□□□ 0.16
SPIDR-221ENST00000523814 SPATA7Q9P0W8 599 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 GALPQ9UBC7 116 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 CDC23Q9UJX2 597 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 FBXL4Q9UKA2 621 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 NXT1Q9UKK6 140 aaKnown RBP16.07■□□□□ 0.16
SPIDR-221ENST00000523814 HS3ST3B1Q9Y662 390 aa16.07■□□□□ 0.16
SPIDR-221ENST00000523814 ANKRD12Q6UB98 2062 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 LOC105369274A0A096LPK9 316 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 LOC102723532A0A0G2JNH3 316 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 KRT87PA6NCN2 255 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 AVILO75366 819 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 CBX6O95503 412 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 ERGP11308 486 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 CHRM3P20309 590 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 OGNP20774 298 aaKnown RBP16.06■□□□□ 0.16
SPIDR-221ENST00000523814 CXCR5P32302 372 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 MRPL49Q13405 166 aaKnown RBP16.06■□□□□ 0.16
SPIDR-221ENST00000523814 KCNJ11Q14654 390 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 EIF2S3LQ2VIR3 472 aaKnown RBP16.06■□□□□ 0.16
SPIDR-221ENST00000523814 ANKRD20A4Q4UJ75 823 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 PRAMEF13Q5VWM6 474 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 FRMPD2BQ6IN97 320 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 NEPROQ6NW34 567 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 Q6ZS92 163 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 CENPUQ71F23 418 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 CAND1Q86VP6 1230 aaKnown RBP16.06■□□□□ 0.16
SPIDR-221ENST00000523814 OR4N4Q8N0Y3 316 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 CISD2Q8N5K1 135 aaKnown RBP16.06■□□□□ 0.16
SPIDR-221ENST00000523814 OR9A1PQ8NGU1 263 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 SSC4DQ8WTU2 575 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 BARD1Q99728 777 aaKnown RBP16.06■□□□□ 0.16
SPIDR-221ENST00000523814 SLC6A20Q9NP91 592 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 SEMA3GQ9NS98 782 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 ASF1BQ9NVP2 202 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 CTSFQ9UBX1 484 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 VPS9D1Q9Y2B5 631 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 CRYL1Q9Y2S2 319 aa16.06■□□□□ 0.16
SPIDR-221ENST00000523814 SPTAN1Q13813 2472 aaKnown RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 MAGEB16A2A368 324 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 OR2A25A4D2G3 310 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 PSIP1O75475 530 aaKnown RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 MED26O95402 600 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 EMP3P54852 163 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 YBX1P67809 324 aaKnown RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 GPS1Q13098 491 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 FASTKQ14296 549 aaKnown RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 ARHGAP19Q14CB8 494 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 NAA25Q14CX7 972 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 TRIP13Q15645 432 aaPredicted RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 KCTD19Q17RG1 926 aaPredicted RBP16.05■□□□□ 0.16
SPIDR-221ENST00000523814 ACSBG2Q5FVE4 666 aa16.05■□□□□ 0.16
SPIDR-221ENST00000523814 PRMT9Q6P2P2 845 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms