RNA–Protein interactions for RNA: ENST00000523746.5

PTK2-250, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-250	ENST00000523746	TAZ	Q16635	292 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	CTU2	Q2VPK5	515 aa	Known RBP	4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	XKR3	Q5GH77	459 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	SHQ1	Q6PI26	577 aa	Known RBP	4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	C15orf39	Q6ZRI6	1047 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	SPATA21	Q7Z572	469 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	NRARP	Q7Z6K4	114 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	TRPT1	Q86TN4	253 aa	Known RBP	4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	RYBP	Q8N488	228 aa	Predicted RBP	4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	ATAD1	Q8NBU5	361 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	OR10Q1	Q8NGQ4	319 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	GDAP1	Q8TB36	358 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	TM9SF4	Q92544	642 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	DNASE1L2	Q92874	299 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	P2RX5	Q93086	422 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	STAMBPL1	Q96FJ0	436 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	ZNF354B	Q96LW1	612 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	CCDC114	Q96M63	670 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	GPATCH1	Q9BRR8	931 aa	Known RBP	4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	MIS12	Q9H081	205 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	TLE6	Q9H808	572 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	DDX43	Q9NXZ2	648 aa	Known RBP	4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	STUB1	Q9UNE7	303 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	LIPT1	Q9Y234	373 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	KCNK7	Q9Y2U2	307 aa		4.27	□□□□□ -1.73
PTK2-250	ENST00000523746	IGHV4-61	A0A0C4DH41	118 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	ANKRD61	A6NGH8	418 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	C2orf81	A6NN90	581 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	SLU7	O95391	586 aa	Known RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	MOCS3	O95396	460 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	NADK	O95544	446 aa	Predicted RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	IGHV4-59	P01825	116 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	ERVK-10	P10266	1014 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	ATP5D	P30049	168 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	CDX1	P47902	265 aa	Predicted RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	ILF2	Q12905	390 aa	Known RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	PHKG1	Q16816	387 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	PDLIM3	Q53GG5	364 aa	Predicted RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	SPOUT1	Q5T280	376 aa	Known RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	SLC35E4	Q6ICL7	350 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	NHLRC1	Q6VVB1	395 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	RBMS3	Q6XE24	437 aa	Known RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	OTOA	Q7RTW8	1153 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	RTN4RL2	Q86UN3	420 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	NDUFAF2	Q8N183	169 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	LMNTD1	Q8N9Z9	388 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	ZNF383	Q8NA42	475 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	TRIM58	Q8NG06	486 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	FIBIN	Q8TAL6	211 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	SEPT1	Q8WYJ6	367 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	ZNF524	Q96C55	264 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	THOC1	Q96FV9	657 aa	Known RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	VMP1	Q96GC9	406 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	HES6	Q96HZ4	224 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	MAP3K3	Q99759	626 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	DESI2	Q9BSY9	194 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	GTPBP2	Q9BX10	602 aa	Known RBP	4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	OR2B2	Q9GZK3	357 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	CPVL	Q9H3G5	476 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	ECHDC1	Q9NTX5	307 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	LRP12	Q9Y561	859 aa		4.26	□□□□□ -1.73
PTK2-250	ENST00000523746	WDR81	Q562E7	1941 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746		A4D1N5	150 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	OOEP	A6NGQ2	149 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	SNX3	O60493	162 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	SELENOF	O60613	162 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	LUC7L3	O95232	432 aa	Known RBP	4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	PGLS	O95336	258 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	IGLV2-11	P01706	119 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	CDH3	P22223	829 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	ITGA3	P26006	1051 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	COPB2	P35606	906 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	RASGEF1B	Q0VAM2	473 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	GPR17	Q13304	367 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	HERC3	Q15034	1050 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	TAF13	Q15543	124 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	XKR6	Q5GH73	641 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	NHSL2	Q5HYW2	709 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	LRRC73	Q5JTD7	316 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	RUSC1-AS1	Q66K80	236 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	OR4A47	Q6IF82	309 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	PIWIL3	Q7Z3Z3	882 aa	Known RBP	4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	LGI2	Q8N0V4	545 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	DNAJC22	Q8N4W6	341 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	STPG4	Q8N801	248 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	ATP6V1E2	Q96A05	226 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	PRRG4	Q9BZD6	226 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	ZMYND12	Q9H0C1	365 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	SHARPIN	Q9H0F6	387 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	ACTL8	Q9H568	366 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	BICC1	Q9H694	974 aa	Known RBP	4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	SIX2	Q9NPC8	291 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	LEF1	Q9UJU2	399 aa	Predicted RBP	4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	RIPK3	Q9Y572	518 aa		4.25	□□□□□ -1.73
PTK2-250	ENST00000523746	IGSF1	Q8N6C5	1336 aa		4.24	□□□□□ -1.73
PTK2-250	ENST00000523746	PRSS44	E7EML9	344 aa		4.24	□□□□□ -1.73
PTK2-250	ENST00000523746		H0YAE9	185 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms