RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 DDX43Q9NXZ2 648 aaKnown RBP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 BCCIPQ9P287 314 aaKnown RBP eCLIP3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 SUFUQ9UMX1 484 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 NFE2L3Q9Y4A8 694 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 PCDHGB5Q9Y5G0 923 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 TRRAPQ9Y4A5 3859 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 WDR19Q8NEZ3 1342 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 DENND4CQ5VZ89 1909 aa3.64□□□□□ -1.83
NSMCE2-211ENST00000523549 TENM1Q9UKZ4 2725 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 IGKV3D-20A0A0C4DH25 116 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 IGKV6D-41A0A0C4DH26 115 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 A0A1W2PS18 150 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 FAM90A7PA6NKC0 464 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 FAM90A22PA8MWA6 464 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 FAM90A12PA8MX19 464 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 FAM90A23PA8MXZ1 464 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 B9A039 149 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 C16orf97H3BN30 126 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 TRDMT1O14717 391 aaKnown RBP3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 ADAM12O43184 909 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 CEP104O60308 925 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 BAG4O95429 457 aaKnown RBP3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 GNSP15586 552 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 CD53P19397 219 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 KLK2P20151 261 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 CHATP28329 748 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 SLC1A4P43007 532 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 CLCN3P51790 818 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 NR1H2P55055 460 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 TFCP2Q12800 502 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 POSTNQ15063 836 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 ITPRIPL2Q3MIP1 535 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 ARHGEF16Q5VV41 709 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 SLC26A9Q7LBE3 791 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 MOGAT3Q86VF5 341 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 ZGRF1Q86YA3 2104 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 CERS3Q8IU89 383 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 LSMEM2Q8N112 164 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 GJC3Q8NFK1 279 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 OR13A1Q8NGR1 328 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 TAS1R2Q8TE23 839 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 CNOT9Q92600 299 aaKnown RBP3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 CNDP2Q96KP4 475 aaKnown RBP3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 CRNKL1Q9BZJ0 848 aaKnown RBP3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 STN1Q9H668 368 aaKnown RBP3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 POLR1BQ9H9Y6 1135 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 TRPV4Q9HBA0 871 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 C1RLQ9NZP8 487 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 STK39Q9UEW8 545 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 RPH3AQ9Y2J0 694 aaPredicted RBP3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 A3GALT2U3KPV4 340 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 SCN8AQ9UQD0 1980 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 MYOFQ9NZM1 2061 aa3.63□□□□□ -1.83
NSMCE2-211ENST00000523549 PLXNA2O75051 1894 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 NUMA1Q14980 2115 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 A0A1W2PNU3 283 aaPredicted RBP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 SOCS6O14544 535 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 ANP32CO43423 234 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 PLRG1O43660 514 aaKnown RBP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 PRKAB2O43741 272 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 KLK8O60259 260 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 ZNF500O60304 480 aaPredicted RBP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 PCNAP12004 261 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 RXRAP19793 462 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 NR1D1P20393 614 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 STX2P32856 288 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 YWHAZP63104 245 aaKnown RBP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 FOXD4Q12950 439 aaPredicted RBP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 RUNX2Q13950 521 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 TEAD2Q15562 447 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 TGIF1Q15583 401 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 C12orf60Q5U649 245 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 MOB3CQ70IA8 216 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 DSG4Q86SJ6 1040 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 TBC1D26Q86UD7 250 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 VASH2Q86V25 355 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 TGIF2LYQ8IUE0 185 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 CEP70Q8NHQ1 597 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 CCT6BQ92526 530 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 RILPL2Q969X0 211 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 ARSGQ96EG1 525 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 IWS1Q96ST2 819 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 POLR3CQ9BUI4 534 aaPredicted RBP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 FAM124BQ9H5Z6 455 aaPredicted RBP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 KLHL1Q9NR64 748 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 PXMP2Q9NR77 195 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 KCNS2Q9ULS6 477 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 SATB2Q9UPW6 733 aa3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 MYH9P35579 1960 aaKnown RBP3.62□□□□□ -1.83
NSMCE2-211ENST00000523549 CHD3Q12873 2000 aaKnown RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 AKAP6Q13023 2319 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 IGKV3D-15A0A087WSY6 115 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 IGHV1OR15-9A0A0B4J2B8 117 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 PABPN1LA6NDY0 278 aaKnown RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 SH2D7A6NKC9 451 aaPredicted RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 MTA2O94776 668 aa3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 LDOC1O95751 146 aaPredicted RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 LDHAP00338 332 aaKnown RBP3.61□□□□□ -1.83
NSMCE2-211ENST00000523549 UQCRFS1P1P0C7P4 283 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms