RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 DNMT3AQ9Y6K1 912 aaPredicted RBP16.33■□□□□ 0.2
SREK1-212ENST00000522912 PCM1Q15154 2024 aa16.33■□□□□ 0.2
SREK1-212ENST00000522912 RPSAP08865 295 aaKnown RBP16.32■□□□□ 0.2
SREK1-212ENST00000522912 HSD17B1P14061 328 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 NPPBP16860 134 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 HNF4AP41235 474 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 TAP2Q03519 686 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 MAP7D1Q3KQU3 841 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 METRNLQ641Q3 311 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 CAPN13Q6MZZ7 669 aaPredicted RBP16.32■□□□□ 0.2
SREK1-212ENST00000522912 KIAA1161Q6NSJ0 714 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 TLDC1Q6P9B6 456 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 SLCO4C1Q6ZQN7 724 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 GALNT13Q8IUC8 556 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 SLC44A3Q8N4M1 653 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 OR5AR1Q8NGP9 310 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 ZBTB18Q99592 522 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 SGPP1Q9BX95 441 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 CLMPQ9H6B4 373 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 ASF1AQ9Y294 204 aa16.32■□□□□ 0.2
SREK1-212ENST00000522912 H0YIV9 168 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 KMOO15229 486 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 NPPAP01160 153 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 C8BP07358 591 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 AMD1P17707 334 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 DRD1P21728 446 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 TACR1P25103 407 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 GRSF1Q12849 480 aaKnown RBP eCLIP16.31■□□□□ 0.2
SREK1-212ENST00000522912 E2F2Q14209 437 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 ADNP2Q6IQ32 1131 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 NANOGP8Q6NSW7 305 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 ZFP1Q6P2D0 407 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 CYP2R1Q6VVX0 501 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 CHRDL2Q6WN34 429 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 TMEM74Q96NL1 305 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 MTERF1Q99551 399 aaKnown RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 PRO3102Q9H379 93 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 C8orf33Q9H7E9 229 aaPredicted RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 NANOGQ9H9S0 305 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 SGK2Q9HBY8 427 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 PHPT1Q9NRX4 125 aaPredicted RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 GPRC5BQ9NZH0 403 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 KCNE2Q9Y6J6 123 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 POU3F3P20264 500 aaPredicted RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 MAT2AP31153 395 aaKnown RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 IGFALSP35858 605 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 PNLIPRP1P54315 467 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 ZNF33BQ06732 778 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 CSTF3Q12996 717 aaKnown RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 TSTA3Q13630 321 aaPredicted RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 FAM174BQ3ZCQ3 159 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 SPANXN4Q5MJ08 99 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 HORMAD1Q86X24 394 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 PQLC1Q8N2U9 271 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 GLB1L3Q8NCI6 653 aaPredicted RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 TFGQ92734 400 aaPredicted RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 SIPA1Q96FS4 1042 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 RSRC1Q96IZ7 334 aaKnown RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 APOLD1Q96LR9 279 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 IL17FQ96PD4 163 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 FZD3Q9NPG1 666 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 ITM2CQ9NQX7 267 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 SPATA6Q9NWH7 488 aaPredicted RBP16.31■□□□□ 0.2
SREK1-212ENST00000522912 PLAGL1Q9UM63 463 aa16.31■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3DA0A087WVF3 549 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3IA0A087WXS9 549 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3EA0A087X179 549 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3KA0A087X1G2 549 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 PRSS51A0A1B0GVH4 220 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TCRBV3S1A0A5B6 114 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3FA6NER0 549 aaPredicted RBP16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3LB9A6J9 549 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3HP0C7X1 549 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 PRPS2P11908 318 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 MYCLP1P12525 358 aaPredicted RBP16.3■□□□□ 0.2
SREK1-212ENST00000522912 SDC1P18827 310 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 CLDN8P56748 225 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 PLIN5Q00G26 463 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 DDX39BQ13838 428 aaKnown RBP16.3■□□□□ 0.2
SREK1-212ENST00000522912 CATSPEREQ5SY80 951 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 LPCAT4Q643R3 524 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3GQ6DHY5 549 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3CQ6IPX1 549 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TMPRSS11BQ86T26 416 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TBC1D3Q8IZP1 549 aaPredicted RBP16.3■□□□□ 0.2
SREK1-212ENST00000522912 SLC13A3Q8WWT9 602 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 NAF1Q96HR8 494 aaKnown RBP16.3■□□□□ 0.2
SREK1-212ENST00000522912 FCRL1Q96LA6 429 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 NRTNQ99748 197 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 CD93Q9NPY3 652 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 TMED5Q9Y3A6 229 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 NEUROG3Q9Y4Z2 214 aa16.3■□□□□ 0.2
SREK1-212ENST00000522912 CFAP20Q9Y6A4 193 aaKnown RBP16.3■□□□□ 0.2
SREK1-212ENST00000522912 GPR89AB7ZAQ6 455 aa16.29■□□□□ 0.2
SREK1-212ENST00000522912 GPR89BP0CG08 455 aa16.29■□□□□ 0.2
SREK1-212ENST00000522912 ATP6V1B2P21281 511 aa16.29■□□□□ 0.2
SREK1-212ENST00000522912 GSK3BP49841 420 aa16.29■□□□□ 0.2
SREK1-212ENST00000522912 PPP2CBP62714 309 aa16.29■□□□□ 0.2
SREK1-212ENST00000522912 PPP2CAP67775 309 aa16.29■□□□□ 0.2
SREK1-212ENST00000522912 MRPS21P82921 87 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms