RNA–Protein interactions for RNA: ENST00000522045.5

SGCE-211, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 408 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-211ENST00000522045 OBSCNQ5VST9 7968 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 DDX60LQ5H9U9 1706 aaKnown RBP4.26□□□□□ -1.73
SGCE-211ENST00000522045 DOT1LQ8TEK3 1739 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 COL4A1P02462 1669 aa4.26□□□□□ -1.73
SGCE-211ENST00000522045 NUP98P52948 1817 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 COL16A1Q07092 1604 aaPredicted RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 LRRIQ3A6PVS8 624 aaPredicted RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 PRR32B1ATL7 298 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 EIF3CLB5ME19 914 aaKnown RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 E9PQ18 207 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 LAD1O00515 517 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 TNFSF14O43557 240 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 KLRC4O43908 158 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 NKX2-2O95096 273 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 NADKO95544 446 aaPredicted RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 RPN1P04843 607 aaKnown RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 HMBSP08397 361 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 SCG2P13521 617 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 CALML3P27482 149 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 HNRNPH3P31942 346 aaKnown RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 CYLC1P35663 651 aaPredicted RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 CCT6AP40227 531 aaKnown RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 PRPHP41219 470 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 MAGEA9P43362 315 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 STX17P56962 302 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 KRT83P78385 493 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 PPARDQ03181 441 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 PTP4A2Q12974 167 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 ORC2Q13416 577 aaPredicted RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 UGP2Q16851 508 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 COL24A1Q17RW2 1714 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 CCDC152Q4G0S7 254 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 CDONQ4KMG0 1287 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 RAB6CQ53S08 254 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 HSP90B2PQ58FF3 399 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 HSP90AA4PQ58FG1 418 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 NDUFAF5Q5TEU4 345 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 ZNF613Q6PF04 617 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 BHLHB9Q6PI77 547 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 WDR59Q6PJI9 974 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 TSSK4Q6SA08 328 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 CCDC170Q8IYT3 715 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 MMGT1Q8N4V1 131 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 EMC1Q8N766 993 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 C4orf32Q8N8J7 132 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 AMER3Q8N944 861 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 CCDC148Q8NFR7 591 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 OR8K1Q8NGG5 319 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 AFAP1L1Q8TED9 768 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 AENQ8WTP8 325 aaKnown RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 ERGIC2Q96RQ1 377 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 SEMA3CQ99985 751 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 NUP58Q9BVL2 599 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 TSGA10Q9BZW7 698 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 CCSER1Q9C0I3 900 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 RAB6CQ9H0N0 254 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 ZCCHC17Q9NP64 241 aaKnown RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 ZNF71Q9NQZ8 489 aaPredicted RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 VPS18Q9P253 973 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 ABI3Q9P2A4 366 aa4.25□□□□□ -1.73
SGCE-211ENST00000522045 TRMT112Q9UI30 125 aaKnown RBP4.25□□□□□ -1.73
SGCE-211ENST00000522045 ATP8B3O60423 1300 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 FAM205AQ6ZU69 1335 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 TTC26A0AVF1 554 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 C1orf226A1L170 272 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 PSMA7O14818 248 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 N4BP1O75113 896 aaKnown RBP4.24□□□□□ -1.73
SGCE-211ENST00000522045 JRKO75564 520 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 LCA5LO95447 670 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 TPOP07202 933 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 RHOXF2BP0C7M4 288 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 EPB41P11171 864 aaKnown RBP4.24□□□□□ -1.73
SGCE-211ENST00000522045 GATA1P15976 413 aaPredicted RBP4.24□□□□□ -1.73
SGCE-211ENST00000522045 PRLRP16471 622 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 ANXA7P20073 488 aaKnown RBP4.24□□□□□ -1.73
SGCE-211ENST00000522045 CCNE1P24864 410 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 CNTFP26441 200 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 CASP1P29466 404 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 PRCPP42785 496 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 CTSCP53634 463 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 EIF5P55010 431 aaKnown RBP4.24□□□□□ -1.73
SGCE-211ENST00000522045 SNRPD1P62314 119 aaKnown RBP4.24□□□□□ -1.73
SGCE-211ENST00000522045 ZBED6P86452 979 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 IL17AQ16552 155 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 PNLIPRP3Q17RR3 467 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 SBK1Q52WX2 424 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 FAM69AQ5T7M9 428 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 GALNT17Q6IS24 598 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 LRRC31Q6UY01 552 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 GBP6Q6ZN66 633 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 ADGRA1Q86SQ6 560 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 ISCA2Q86U28 154 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 IQCA1Q86XH1 822 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 FAM114A1Q8IWE2 563 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 EFCAB13Q8IY85 973 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 SCML4Q8N228 414 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 SLC5A8Q8N695 610 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 ZNF614Q8N883 585 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 NFKBIDQ8NI38 313 aa4.24□□□□□ -1.73
SGCE-211ENST00000522045 GRHL3Q8TE85 626 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms