RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 KLHL14Q9P2G3 628 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 GMEB2Q9UKD1 530 aa20.68■□□□□ 0.9
R3HCC1-208ENST00000522012 A0A0G2JND7 137 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 SLCO1B7G3V0H7 640 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 ARHGAP33O14559 1287 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 CLGNO14967 610 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 NOBOXO60393 691 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 DFNA5O60443 496 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 SYPP08247 313 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 EBLN1P0CF75 366 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 EPHA8P29322 1005 aaPredicted RBP20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 AQP5P55064 265 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 FOXA1P55317 472 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 OGFOD3Q6PK18 319 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 KIRREL3Q8IZU9 778 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 ARL14Q8N4G2 192 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 CDYL2Q8N8U2 506 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 AVL9Q8NBF6 648 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 HMGCLL1Q8TB92 370 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 FAR2Q96K12 515 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 NUSAP1Q9BXS6 441 aaKnown RBP20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 SMOC1Q9H4F8 434 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 VTI1BQ9UEU0 232 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 TAC3Q9UHF0 121 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 RNF11Q9Y3C5 154 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 TIMM22Q9Y584 194 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 PCDHGA5Q9Y5G8 931 aa20.67■□□□□ 0.9
R3HCC1-208ENST00000522012 ZNF318Q5VUA4 2279 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 GON4LQ3T8J9 2241 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 E7EQ34 232 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 MATN2O00339 956 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 CLDN9O95484 217 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 HGFP14210 728 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 SERPINB3P29508 390 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 HK2P52789 917 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 IRF8Q02556 426 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 CHIT1Q13231 466 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 PDCD2Q16342 344 aaPredicted RBP20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 XKR6Q5GH73 641 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 LCTLQ6UWM7 567 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 GATAD2AQ86YP4 633 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 RBM12BQ8IXT5 1001 aaKnown RBP20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 NEIL2Q969S2 332 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 HAUS8Q9BT25 410 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 GTPBP2Q9BX10 602 aaKnown RBP20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 PCBD2Q9H0N5 130 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 GPRC5BQ9NZH0 403 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 OR6C2Q9NZP2 312 aa20.66■□□□□ 0.9
R3HCC1-208ENST00000522012 A0A1W2PPV9 198 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 HDAC3O15379 428 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 YKT6O15498 198 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 UROSP10746 265 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 GNAZP19086 355 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 C6orf132Q5T0Z8 1188 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 KANK2Q63ZY3 851 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 TMEM26Q6ZUK4 368 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 ZNF761Q86XN6 746 aaPredicted RBP20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 OR2I1PQ8NGU4 316 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 METTL6Q8TCB7 284 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 PPP1R36Q96LQ0 422 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 KCNK13Q9HB14 408 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 SH2B3Q9UQQ2 575 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 SPAG17Q6Q759 2223 aa20.65■□□□□ 0.9
R3HCC1-208ENST00000522012 WDFY4Q6ZS81 3184 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 KHNYNO15037 678 aaKnown RBP20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 SKAP2O75563 359 aaPredicted RBP20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 CER1O95813 267 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 ENO1P06733 434 aaKnown RBP20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 CAPN1P07384 714 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 CHRM5P08912 532 aaPredicted RBP20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 PSMB5P28074 263 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 ARFIP2P53365 341 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 C14orf28Q4W4Y0 310 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 VWA5B1Q5TIE3 1220 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 MAVSQ7Z434 540 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 KYQ8NBH2 561 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 SAP25Q8TEE9 199 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 SLC5A11Q8WWX8 675 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 SEC16BQ96JE7 1060 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 SIKE1Q9BRV8 207 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 TMEM120AQ9BXJ8 343 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 NUF2Q9BZD4 464 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 SPHK1Q9NYA1 384 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 TRPS1Q9UHF7 1281 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 PCDHB11Q9Y5F2 797 aa20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 TNRC6BQ9UPQ9 1833 aaKnown RBP20.64■□□□□ 0.9
R3HCC1-208ENST00000522012 ZFC3H1O60293 1989 aaKnown RBP20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 OR6C74A6NCV1 312 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 ISM1B1AKI9 464 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 BTN3A3O00478 584 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 ZNF195O14628 629 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 PPM1DO15297 605 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 RRP9O43818 475 aaKnown RBP20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 PRAMEF4O60810 478 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 CHEK2O96017 543 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 HMOX2P30519 316 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 FASLGP48023 281 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 CCT8P50990 548 aa20.63■□□□□ 0.89
R3HCC1-208ENST00000522012 DOC2AQ14183 400 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms