RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 DSELQ8IZU8 1212 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ATP6V0D2Q8N8Y2 350 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 CLEC1AQ8NC01 280 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 TFB1MQ8WVM0 346 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC44A1Q8WWI5 657 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 CCT6BQ92526 530 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 NTAN1Q96AB6 310 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 ISG20Q96AZ6 181 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SDCCAG3Q96C92 435 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 PGAP3Q96FM1 320 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 FER1L6-AS2Q96M78 137 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SPATA13Q96N96 652 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SMC6Q96SB8 1091 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 DMRTA2Q96SC8 542 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 PAIP2Q9BPZ3 127 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 GPATCH1Q9BRR8 931 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 NDC1Q9BTX1 674 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SPON2Q9BUD6 331 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 MENTQ9BUN1 341 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 MLPHQ9BV36 600 aaPredicted RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 OSBPL1AQ9BXW6 950 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 UCK2Q9BZX2 261 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 KLC2Q9H0B6 622 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 NSRP1Q9H0G5 558 aaKnown RBP7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 WDR26Q9H7D7 661 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SMYD2Q9NRG4 433 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 FGFR1OP2Q9NVK5 253 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SENP1Q9P0U3 644 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SEMA5BQ9P283 1151 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC17A4Q9Y2C5 497 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 TRRAPQ9Y4A5 3859 aa7.06□□□□□ -1.28
CTNNA1-227ENST00000521387 CCDC88CQ9P219 2028 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 ARID1AO14497 2285 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 KRTAP9-6A0A140TA67 174 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 TCRBV9S1A1TA0A576 114 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 NKX2-6A6NCS4 301 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 SERINC4A6NH21 518 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 DRGXA6NNA5 263 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 GOLGA8RI6L899 631 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 INSIG1O15503 277 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 ZNHIT1O43257 154 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 UGT1A9O60656 530 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 KLHL41O60662 606 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 CPNE3O75131 537 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 GSRP00390 522 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 CPP00450 1065 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 APRTP07741 180 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 GSTA2P09210 222 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 MYCLP1P12525 358 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 MMP12P39900 470 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 MAGEA3P43357 314 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 HCAR3P49019 387 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 FOXL2P58012 376 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 PPP1CAP62136 330 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 PDE1BQ01064 536 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC18A2Q05940 514 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 KRTAP1-1Q07627 177 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 ACTN3Q08043 901 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 DMPKQ09013 629 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 AP1B1Q10567 949 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 WASHC5Q12768 1159 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 MYBPHQ13203 477 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 SPARCL1Q14515 664 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 PDK1Q15118 436 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 HHATQ5VTY9 493 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 RETSATQ6NUM9 610 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 IYDQ6PHW0 289 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 UNC5AQ6ZN44 842 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 RFX8Q6ZV50 586 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 SH2D5Q6ZV89 423 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 BZW1Q7L1Q6 419 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 SETD3Q86TU7 594 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 CDC20BQ86Y33 519 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 ARMC2Q8NEN0 867 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 OR2AP1Q8NGE2 309 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 OR1N1Q8NGS0 311 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 CA5BP1Q8WTZ4 195 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 RMND5BQ96G75 393 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 SLC41A2Q96JW4 573 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 MAGEB10Q96LZ2 347 aaPredicted RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 LRFN5Q96NI6 719 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 GBP5Q96PP8 586 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 CYTH2Q99418 400 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 EBNA1BP2Q99848 306 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 TEX101Q9BY14 249 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 C12orf65Q9H3J6 166 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 UGT1A7Q9HAW7 530 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 UGT1A10Q9HAW8 530 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 UGT1A8Q9HAW9 530 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 GPAMQ9HCL2 828 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 SSU72Q9NP77 194 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 RASSF1Q9NS23 344 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 P4HTMQ9NXG6 502 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 IL17CQ9P0M4 197 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 SAMD15Q9P1V8 674 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 ABI3Q9P2A4 366 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 TBC1D29Q9UFV1 150 aa7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 ZC3H7BQ9UGR2 993 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-227ENST00000521387 IGHV5-51A0A0C4DH38 117 aa7.04□□□□□ -1.28
CTNNA1-227ENST00000521387 TSPAN11A1L157 253 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms