RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 FASTKQ14296 549 aaKnown RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 SSPNQ14714 243 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 ARHGAP19Q14CB8 494 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 TCTE1Q5JU00 501 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 MRPL14Q6P1L8 145 aaKnown RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 CYHR1Q6ZMK1 362 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 SYDE1Q6ZW31 735 aaPredicted RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 KCNMB4Q86W47 210 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 FBXO15Q8NCQ5 510 aaPredicted RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 GIMAP7Q8NHV1 300 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 DLG3Q92796 817 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 INPP5DQ92835 1189 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 MIPEPQ99797 713 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 FAM167BQ9BTA0 163 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 NAT9Q9BTE0 207 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 MLXIPLQ9NP71 852 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 ACSS2Q9NR19 701 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 FAM114A2Q9NRY5 505 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 IARS2Q9NSE4 1012 aaKnown RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 IRAK4Q9NWZ3 460 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 GPN3Q9UHW5 284 aaPredicted RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 TSR3Q9UJK0 312 aaKnown RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 SAR1BQ9Y6B6 198 aa16.36■□□□□ 0.21
SQLE-205ENST00000521232 PRRC2CQ9Y520 2896 aaKnown RBP16.36■□□□□ 0.21
SQLE-205ENST00000521232 GFYI3L273 518 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 CTSVO60911 334 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 CATP04040 527 aaKnown RBP16.35■□□□□ 0.21
SQLE-205ENST00000521232 ENO3P13929 434 aaPredicted RBP16.35■□□□□ 0.21
SQLE-205ENST00000521232 NR1D1P20393 614 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 ALAS2P22557 587 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 HSD17B2P37059 387 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 CCL11P51671 97 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 MPP1Q00013 466 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 KCNC4Q03721 635 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 TLE1Q04724 770 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 KLRB1Q12918 225 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 CRYMQ14894 314 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 NKAIN1Q4KMZ8 207 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 MSS51Q4VC12 460 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 YOD1Q5VVQ6 348 aaPredicted RBP16.35■□□□□ 0.21
SQLE-205ENST00000521232 CPZQ66K79 652 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 ASB18Q6ZVZ8 466 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 C2CD4AQ8NCU7 369 aaPredicted RBP16.35■□□□□ 0.21
SQLE-205ENST00000521232 ASB11Q8WXH4 323 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 CAPZA3Q96KX2 299 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 RUNDC3BQ96NL0 473 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 PKP4Q99569 1192 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 NAPGQ99747 312 aaPredicted RBP16.35■□□□□ 0.21
SQLE-205ENST00000521232 AARSD1Q9BTE6 412 aaKnown RBP16.35■□□□□ 0.21
SQLE-205ENST00000521232 TRIM4Q9C037 500 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 IFT80Q9P2H3 777 aaPredicted RBP16.35■□□□□ 0.21
SQLE-205ENST00000521232 PCDHGA9Q9Y5G4 932 aaKnown RBP16.35■□□□□ 0.21
SQLE-205ENST00000521232 FLNCQ14315 2725 aa16.35■□□□□ 0.21
SQLE-205ENST00000521232 FITM1A5D6W6 292 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 CEACAM4O75871 244 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 ZIC2O95409 532 aaPredicted RBP16.34■□□□□ 0.21
SQLE-205ENST00000521232 PDGFAP04085 211 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 CHAF1BQ13112 559 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 CUL1Q13616 776 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 GRM7Q14831 915 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 NAA25Q14CX7 972 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 MORF4L2Q15014 288 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 SPANXN3Q5MJ09 141 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 TTLL10Q6ZVT0 673 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 MED25Q71SY5 747 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 RAB43Q86YS6 212 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 IGDCC3Q8IVU1 814 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 TMEM102Q8N9M5 508 aaPredicted RBP16.34■□□□□ 0.21
SQLE-205ENST00000521232 OR2Y1Q8NGV0 311 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 GABPB2Q8TAK5 448 aaPredicted RBP16.34■□□□□ 0.21
SQLE-205ENST00000521232 CD200R1Q8TD46 325 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 SMPDL3AQ92484 453 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 IP6K3Q96PC2 410 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 GPR21Q99679 349 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 SELENOSQ9BQE4 189 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 EPN3Q9H201 632 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 SLC22A11Q9NSA0 550 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 NDOR1Q9UHB4 597 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 PYCARDQ9ULZ3 195 aa16.34■□□□□ 0.21
SQLE-205ENST00000521232 TNRC6AQ8NDV7 1962 aaKnown RBP16.34■□□□□ 0.21
SQLE-205ENST00000521232 A0A1B0GX78 115 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 OR2A25A4D2G3 310 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 ZNF839A8K0R7 811 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 SMAPO00193 183 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 EIF3FO00303 357 aaPredicted RBP16.33■□□□□ 0.2
SQLE-205ENST00000521232 DSCR3O14972 297 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 ZBTB14O43829 449 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 CNOT3O75175 753 aaKnown RBP16.33■□□□□ 0.2
SQLE-205ENST00000521232 BANF1O75531 89 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 ERVK-10P10266 1014 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 ITGAXP20702 1163 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 MCM3P25205 808 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 GABRB3P28472 473 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 CMPK1P30085 196 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 PNLIPRP1P54315 467 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 YBX1P67809 324 aaKnown RBP16.33■□□□□ 0.2
SQLE-205ENST00000521232 TIAL1Q01085 375 aaKnown RBP eCLIP16.33■□□□□ 0.2
SQLE-205ENST00000521232 DR1Q01658 176 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 FAM214AQ32MH5 1076 aa16.33■□□□□ 0.2
SQLE-205ENST00000521232 WASHC2DQ5SRD0 308 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms