RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 PTBP2Q9UKA9 531 aaKnown RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 MDC1Q14676 2089 aaKnown RBP14.81□□□□□ -0.04
LSM1-203ENST00000520755 KIF26BQ2KJY2 2108 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 A0A1W2PPV9 198 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 GSAPA4D1B5 854 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 FAM221BA6H8Z2 402 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 AGRPO00253 132 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 BTN3A3O00478 584 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 CAPN5O15484 640 aaPredicted RBP14.8□□□□□ -0.04
LSM1-203ENST00000520755 SIX3O95343 332 aaPredicted RBP14.8□□□□□ -0.04
LSM1-203ENST00000520755 BPGMP07738 259 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 RPS17P08708 135 aaKnown RBP14.8□□□□□ -0.04
LSM1-203ENST00000520755 ANXA5P08758 320 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 HIST1H2AGP0C0S8 130 aaPredicted RBP14.8□□□□□ -0.04
LSM1-203ENST00000520755 GFAPP14136 432 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 CPA3P15088 417 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 CHN1P15882 459 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 SPINK2P20155 84 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 HIST1H2ADP20671 130 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 RAB28P51157 221 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 PDX1P52945 283 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 PNLIPRP1P54315 467 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 ALDH18A1P54886 795 aaKnown RBP14.8□□□□□ -0.04
LSM1-203ENST00000520755 INHBCP55103 352 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 TBPL1P62380 186 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 TARDBPQ13148 414 aaKnown RBP eCLIP14.8□□□□□ -0.04
LSM1-203ENST00000520755 CYP2A13Q16696 494 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 PFKFB4Q16877 469 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 ISXQ2M1V0 245 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 CES4AQ5XG92 561 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 SULT1C3Q6IMI6 304 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 TMEM71Q6P5X7 295 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 WDR74Q6RFH5 385 aaPredicted RBP14.8□□□□□ -0.04
LSM1-203ENST00000520755 AGTRAPQ6RW13 159 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 ZNF574Q6ZN55 896 aaPredicted RBP14.8□□□□□ -0.04
LSM1-203ENST00000520755 FAM92BQ6ZTR7 304 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 TAX1BP1Q86VP1 789 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 PLXDC1Q8IUK5 500 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 C10orf107Q8IVU9 208 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 KLHDC8AQ8IYD2 350 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 RAB42Q8N4Z0 105 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 C2orf73Q8N5S3 287 aaPredicted RBP14.8□□□□□ -0.04
LSM1-203ENST00000520755 DCBLD1Q8N8Z6 715 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 CCDC63Q8NA47 563 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 OR4D9Q8NGE8 314 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 OR2L8Q8NGY9 312 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 PHF21BQ96EK2 531 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 MOCOSQ96EN8 888 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 HIST1H2AHQ96KK5 128 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 CCDC74BQ96LY2 380 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 TMEM74Q96NL1 305 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 HIST1H2AJQ99878 128 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 DPYSL5Q9BPU6 564 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 H2AFJQ9BTM1 129 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 TRIM54Q9BYV2 358 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 ATG10Q9H0Y0 220 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 OXSMQ9NWU1 459 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 MID2Q9UJV3 735 aa14.8□□□□□ -0.04
LSM1-203ENST00000520755 IGHV5-10-1A0A0J9YXX1 117 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 PABPN1LA6NDY0 278 aaKnown RBP14.79□□□□□ -0.04
LSM1-203ENST00000520755 A8MU76 341 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 E7ENX8 843 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 STX16-NPEPL1H3BU86 382 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 STX16O14662 325 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 SMIM24O75264 130 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 IPO13O94829 963 aaKnown RBP14.79□□□□□ -0.04
LSM1-203ENST00000520755 S100BP04271 92 aaPredicted RBP14.79□□□□□ -0.04
LSM1-203ENST00000520755 ADRB1P08588 477 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 FGF3P11487 239 aaPredicted RBP14.79□□□□□ -0.04
LSM1-203ENST00000520755 GGT5P36269 586 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 GDF5P43026 501 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 HSPA7P48741 367 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 ATP1A2P50993 1020 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 PRKAA2P54646 552 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 TAP2Q03519 686 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 MN1Q10571 1320 aaPredicted RBP14.79□□□□□ -0.04
LSM1-203ENST00000520755 ARHGAP19Q14CB8 494 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 PTCHD3Q3KNS1 767 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 ANKS6Q68DC2 871 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 RPS27LQ71UM5 84 aaKnown RBP14.79□□□□□ -0.04
LSM1-203ENST00000520755 SLITRK4Q8IW52 837 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 ADGRF3Q8IZF5 1079 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 OR56A3Q8NH54 315 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 FLVCR1-AS1Q8TAF5 88 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 HMGCLL1Q8TB92 370 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 PYCR2Q96C36 320 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 ZDHHC12Q96GR4 267 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 SGPP1Q9BX95 441 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 RAB11FIP5Q9BXF6 653 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 C1QTNF3Q9BXJ4 246 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 PITPNM3Q9BZ71 974 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 CNOT10Q9H9A5 744 aaKnown RBP14.79□□□□□ -0.04
LSM1-203ENST00000520755 SPHK1Q9NYA1 384 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 NKIRAS1Q9NYS0 192 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 WWOXQ9NZC7 414 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 OR6C2Q9NZP2 312 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 LNPEPQ9UIQ6 1025 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 KLK13Q9UKR3 277 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 TMCO1Q9UM00 188 aa14.79□□□□□ -0.04
LSM1-203ENST00000520755 SH2B3Q9UQQ2 575 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms