RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 CPNE1Q99829 537 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 FNDC11Q9BVV2 318 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 SLA2Q9H6Q3 261 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 FKRPQ9H9S5 495 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 LMAN1LQ9HAT1 526 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 TBC1D7Q9P0N9 293 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 HMG20BQ9P0W2 317 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 CPSF3Q9UKF6 684 aaKnown RBP3.83□□□□□ -1.8
SQLE-204ENST00000520493 CHKBQ9Y259 395 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 PADI2Q9Y2J8 665 aa3.83□□□□□ -1.8
SQLE-204ENST00000520493 PLOD2O00469 737 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 ZNHIT1O43257 154 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 RNASEH1O60930 286 aaKnown RBP3.82□□□□□ -1.8
SQLE-204ENST00000520493 KDM4BO94953 1096 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 BMP10O95393 424 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 SLC16A8O95907 504 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 H1F0P07305 194 aaKnown RBP3.82□□□□□ -1.8
SQLE-204ENST00000520493 SP1P08047 785 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 LINC00271P0C7V0 271 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 PLA2G4BP0C869 781 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 POLR2CP19387 275 aaPredicted RBP3.82□□□□□ -1.8
SQLE-204ENST00000520493 ACAT1P24752 427 aaKnown RBP3.82□□□□□ -1.8
SQLE-204ENST00000520493 CD27P26842 260 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 WNT5AP41221 380 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 GPC3P51654 580 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 LUMP51884 338 aaPredicted RBP3.82□□□□□ -1.8
SQLE-204ENST00000520493 CD81P60033 236 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 COG7P83436 770 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 RUNX1T1Q06455 604 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 TAZQ16635 292 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 CASC4Q6P4E1 433 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 ENPP7Q6UWV6 458 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 TMPRSS11FQ6ZWK6 438 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 DGLUCYQ7Z3D6 616 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 GPALPP1Q8IXQ4 340 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 L3MBTL4Q8NA19 623 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 UXS1Q8NBZ7 420 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 SPATA22Q8NHS9 363 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 HEXDCQ8WVB3 486 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 NSMAFQ92636 917 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 ABHD8Q96I13 439 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 SGK494Q96LW2 274 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 ZNF582Q96NG8 517 aaPredicted RBP3.82□□□□□ -1.8
SQLE-204ENST00000520493 MYADMQ96S97 322 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 TRIM7Q9C029 511 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 ABCG8Q9H221 673 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 SEMA6AQ9H2E6 1030 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 EBF2Q9HAK2 575 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 PRMT8Q9NR22 394 aaPredicted RBP3.82□□□□□ -1.8
SQLE-204ENST00000520493 KLHL9Q9P2J3 617 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 FBXL5Q9UKA1 691 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 STX8Q9UNK0 236 aa3.82□□□□□ -1.8
SQLE-204ENST00000520493 PIN4Q9Y237 131 aaKnown RBP3.82□□□□□ -1.8
SQLE-204ENST00000520493 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.82□□□□□ -1.8
SQLE-204ENST00000520493 ACEP12821 1306 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 PDS5AQ29RF7 1337 aaKnown RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 MEIS2O14770 477 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 VEGFDO43915 354 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 SELENOFO60613 162 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 AKAP3O75969 853 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 WISP2O76076 250 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 PDE9AO76083 593 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 LUC7L3O95232 432 aaKnown RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 PGLSO95336 258 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 GH1P01241 217 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 IGHDP01880 384 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 CSN3P07498 182 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 EPCAMP16422 314 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 VCLP18206 1134 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 CYP11B2P19099 503 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 ANOS1P23352 680 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 CTNNB1P35222 781 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 AHRP35869 848 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 GNL1P36915 607 aaPredicted RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 HSD17B3P37058 310 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 IL15P40933 162 aaPredicted RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 ARCN1P48444 511 aaKnown RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 ADARP55265 1226 aaKnown RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 PTENP60484 403 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 PHEXP78562 749 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 DLK1P80370 383 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 HTD2P86397 168 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 ILF3Q12906 894 aaKnown RBP eCLIP3.81□□□□□ -1.8
SQLE-204ENST00000520493 CUL3Q13618 768 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 GTF2H2Q13888 395 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 SGCBQ16585 318 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 AARDQ4LEZ3 155 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 GTF2H2CQ6P1K8 395 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 GFRALQ6UXV0 394 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 TMEM182Q6ZP80 229 aaPredicted RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 ASB18Q6ZVZ8 466 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 MIER3Q7Z3K6 550 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 ADCK1Q86TW2 530 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 LCA5Q86VQ0 697 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 TMPRSS12Q86WS5 348 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 KMT5CQ86Y97 462 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 SFRP1Q8N474 314 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 GBGT1Q8N5D6 347 aa3.81□□□□□ -1.8
SQLE-204ENST00000520493 CPSF7Q8N684 471 aaKnown RBP3.81□□□□□ -1.8
SQLE-204ENST00000520493 SLC38A5Q8WUX1 472 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms