RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 TMEM139Q8IV31 216 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 MRPL41Q8IXM3 137 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 UBL4BQ8N7F7 174 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 KCT2Q8NC54 265 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 CPT1BQ92523 772 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 HES6Q96HZ4 224 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 HGH1Q9BTY7 390 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 SLC25A23Q9BV35 468 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 NLNQ9BYT8 704 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 CHRNA10Q9GZZ6 450 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 ING2Q9H160 280 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 ACTR5Q9H9F9 607 aaPredicted RBP8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 PIH1D1Q9NWS0 290 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 SERTAD3Q9UJW9 196 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 PCDHB10Q9UN67 800 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 ICKQ9UPZ9 632 aa8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 PCDHGA9Q9Y5G4 932 aaKnown RBP8.96□□□□□ -0.98
CTNNA1-221ENST00000520339 PTPN13Q12923 2485 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 MAST4O15021 2626 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 SLC5A10A0PJK1 596 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 OR51F1A6NGY5 319 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 ARGFXA6NJG6 315 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 C2orf74A8MZ97 194 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 H3BMH7 237 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 LIN7AO14910 233 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 WIPF1O43516 503 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 TPBGLP0DKB5 382 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 CYP2A7P20853 494 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 STIP1P31948 543 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 FOXN2P32314 431 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 GABRA4P48169 554 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 PGDP52209 483 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 ITGA1P56199 1179 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 KIF5AQ12840 1032 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 ZIC1Q15915 447 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 CCDC38Q502W7 563 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 FAM69BQ5VUD6 431 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 VHLLQ6RSH7 139 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 SPESP1Q6UW49 350 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 FAM198BQ6UWH4 519 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 PACS1Q6VY07 963 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 CDHR3Q6ZTQ4 885 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 TRIM73Q86UV7 250 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 SYTL1Q8IYJ3 562 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 TBC1D21Q8IYX1 336 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 SYCE1Q8N0S2 351 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 C17orf53Q8N3J3 647 aaPredicted RBP8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 ZBTB2Q8N680 514 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 ENDOVQ8N8Q3 282 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 OR52K1Q8NGK4 314 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 OR5AR1Q8NGP9 310 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 OR13J1Q8NGT2 312 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 FLVCR1-AS1Q8TAF5 88 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 CLIP3Q96DZ5 547 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 ALS2CR12Q96Q35 445 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 OR2A14Q96R47 310 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 KLHL25Q9H0H3 589 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 FAM60AQ9NP50 221 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 ACSS2Q9NR19 701 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 TCFL5Q9UL49 500 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 RIMKLBQ9ULI2 386 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 SNX7Q9UNH6 387 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 NAV2Q8IVL1 2488 aa8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 ZFC3H1O60293 1989 aaKnown RBP8.95□□□□□ -0.98
CTNNA1-221ENST00000520339 LRRK2Q5S007 2527 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 CCDC78A2IDD5 438 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 ERI2A8K979 691 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 E7EQ34 232 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 QSOX1O00391 747 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 ZNF749O43361 778 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 HCRTR1O43613 425 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 OR1I1O60431 355 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 TMEM63AO94886 807 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 SUN1O94901 812 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 FTH1P02794 183 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 CHRM5P08912 532 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 UGT2B7P16662 529 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 SHMT2P34897 504 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 GRIA1P42261 906 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 PLOD1Q02809 727 aaPredicted RBP8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 SLBPQ14493 270 aaKnown RBP eCLIP8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 BRD3Q15059 726 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 NCF4Q15080 339 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 OASLQ15646 514 aaKnown RBP8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 PTCHD3Q3KNS1 767 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 NADK2Q4G0N4 442 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 TSTD2Q5T7W7 516 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 LYPLAL1Q5VWZ2 237 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 NAPRTQ6XQN6 538 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 ZNF534Q76KX8 674 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 LINC00523Q86TU6 105 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 FAM26EQ8N5C1 309 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 GLIS1Q8NBF1 620 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 ATG4AQ8WYN0 398 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 ELMO1Q92556 727 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 HDAC10Q969S8 669 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.94□□□□□ -0.989e-6■■■□□ 15.7
CTNNA1-221ENST00000520339 TCTN2Q96GX1 697 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 DESI2Q9BSY9 194 aa8.94□□□□□ -0.98
CTNNA1-221ENST00000520339 SPRTNQ9H040 489 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms