RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 MGARPQ8TDB4 240 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 NCSTNQ92542 709 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 OR2A14Q96R47 310 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 MIPEPQ99797 713 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 HAUS8Q9BT25 410 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 MECRQ9BV79 373 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 ERVK-6Q9BXR3 956 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 MLXIPLQ9NP71 852 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 DNAJC11Q9NVH1 559 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 OPTCQ9UBM4 332 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 SLC22A14Q9Y267 594 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 ASB1Q9Y576 335 aa17.19■□□□□ 0.34
SDC2-205ENST00000520233 A0A1W2PQM1 296 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 LRRC14BA6NHZ5 514 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 K7EPI3 171 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 TRIM13O60858 407 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 FKBP9O95302 570 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 RPS17P08708 135 aaKnown RBP17.18■□□□□ 0.34
SDC2-205ENST00000520233 UGT2B7P16662 529 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 NAA20P61599 178 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 SLC5A12Q1EHB4 618 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 ZNF678Q5SXM1 525 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 THEMIS2Q5TEJ8 643 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 WDR74Q6RFH5 385 aaPredicted RBP17.18■□□□□ 0.34
SDC2-205ENST00000520233 ALYREFQ86V81 257 aaKnown RBP17.18■□□□□ 0.34
SDC2-205ENST00000520233 NUDCD3Q8IVD9 361 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 ARFGAP2Q8N6H7 521 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 WDR48Q8TAF3 677 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 SREK1Q8WXA9 508 aaKnown RBP17.18■□□□□ 0.34
SDC2-205ENST00000520233 ZDHHC12Q96GR4 267 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 TMEM237Q96Q45 408 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 OR4K3Q96R72 315 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 DPYSL5Q9BPU6 564 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 PAIP2Q9BPZ3 127 aaKnown RBP17.18■□□□□ 0.34
SDC2-205ENST00000520233 ABCG4Q9H172 646 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 ABCF3Q9NUQ8 709 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 TAC3Q9UHF0 121 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 POMT2Q9UKY4 750 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 PCDHGA1Q9Y5H4 931 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 MYO15AQ9UKN7 3530 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 DMDP11532 3685 aa17.18■□□□□ 0.34
SDC2-205ENST00000520233 NTN3O00634 580 aaPredicted RBP17.17■□□□□ 0.34
SDC2-205ENST00000520233 E2F3O00716 465 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 CAPN5O15484 640 aaPredicted RBP17.17■□□□□ 0.34
SDC2-205ENST00000520233 RFPL3O75679 317 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 CCNDBP1O95273 360 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 CPNE6O95741 557 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 C9P02748 559 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 CHN1P15882 459 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 NPPBP16860 134 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 PSMB5P28074 263 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 PRDX3P30048 256 aaKnown RBP17.17■□□□□ 0.34
SDC2-205ENST00000520233 PIK3CGP48736 1102 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 ABATP80404 500 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 E2F1Q01094 437 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 CFHR1Q03591 330 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 PRDX1Q06830 199 aaKnown RBP17.17■□□□□ 0.34
SDC2-205ENST00000520233 SF1Q15637 639 aaKnown RBP17.17■□□□□ 0.34
SDC2-205ENST00000520233 PDK4Q16654 411 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 UNC50Q53HI1 259 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 ICE2Q659A1 982 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 IRGCQ6NXR0 463 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 SPESP1Q6UW49 350 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 USP53Q70EK8 1073 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 PLXDC1Q8IUK5 500 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 TEX9Q8N6V9 391 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 ZNF483Q8TF39 744 aaPredicted RBP17.17■□□□□ 0.34
SDC2-205ENST00000520233 GFM1Q96RP9 751 aaKnown RBP17.17■□□□□ 0.34
SDC2-205ENST00000520233 CD180Q99467 661 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 ACAT2Q9BWD1 397 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 CAPS2Q9BXY5 557 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 GPRC5BQ9NZH0 403 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 PCTPQ9UKL6 214 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 DYRK1BQ9Y463 629 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 ANGPTL3Q9Y5C1 460 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 KCNE2Q9Y6J6 123 aa17.17■□□□□ 0.34
SDC2-205ENST00000520233 ASCC3Q8N3C0 2202 aaKnown RBP17.17■□□□□ 0.34
SDC2-205ENST00000520233 WDR91A4D1P6 747 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 SUPT7LO94864 414 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 EPB42P16452 691 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 CMPK1P30085 196 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 CSF2RBP32927 897 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 NAGLUP54802 743 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 CDC16Q13042 620 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 GTF2H2Q13888 395 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 GTF2H2CQ6P1K8 395 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 TMEM71Q6P5X7 295 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 GOLGA7Q7Z5G4 137 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 C17orf64Q86WR6 236 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 SNX31Q8N9S9 440 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 OR2L3Q8NG85 312 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 PPP4R1Q8TF05 950 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 GATA5Q9BWX5 397 aaPredicted RBP17.16■□□□□ 0.34
SDC2-205ENST00000520233 PITPNM3Q9BZ71 974 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 ZMYND15Q9H091 742 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 INTS9Q9NV88 658 aaKnown RBP17.16■□□□□ 0.34
SDC2-205ENST00000520233 TOR4AQ9NXH8 423 aa17.16■□□□□ 0.34
SDC2-205ENST00000520233 CDV3Q9UKY7 258 aaKnown RBP17.16■□□□□ 0.34
SDC2-205ENST00000520233 ATXN7L1Q9ULK2 861 aaPredicted RBP17.16■□□□□ 0.34
SDC2-205ENST00000520233 MN1Q10571 1320 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms