RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 NLRP9Q7RTR0 991 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 OVCH1Q7RTY7 1134 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 TMC3Q7Z5M5 1100 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 PAQR7Q86WK9 346 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 PRIMA1Q86XR5 153 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 GHDCQ8N2G8 530 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 AGGF1Q8N302 714 aaeCLIP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 TAB3Q8N5C8 712 aaPredicted RBP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 CCDC89Q8N998 374 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 C19orf47Q8N9M1 422 aaKnown RBP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 DNAAF3Q8N9W5 541 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 FAM98AQ8NCA5 519 aaKnown RBP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 GPR26Q8NDV2 337 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 OR4E2Q8NGC2 313 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 OR2L2Q8NH16 312 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 SLC30A5Q8TAD4 765 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 ENOX1Q8TC92 643 aaKnown RBP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 AGAP11Q8TF27 550 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 SLC20A1Q8WUM9 679 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 LCN9Q8WX39 176 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 MAML1Q92585 1016 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 SDCCAG3Q96C92 435 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 CITED4Q96RK1 184 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 DMRTA2Q96SC8 542 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 SARGQ9BW04 601 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 CEP41Q9BYV8 373 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 NDST4Q9H3R1 872 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 TFB2MQ9H5Q4 396 aaKnown RBP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 CXorf56Q9H5V9 222 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 KCNJ16Q9NPI9 418 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 SPTLC3Q9NUV7 552 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 IRAK4Q9NWZ3 460 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 TAS2R14Q9NYV8 317 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 CWC15Q9P013 229 aaKnown RBP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 DHCR7Q9UBM7 475 aaKnown RBP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 PSMD13Q9UNM6 376 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 TTLL3Q9Y4R7 772 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.68□□□□□ -1.664e-6■□□□□ 10.9
SDCBP-207ENST00000520168 CHD3Q12873 2000 aaKnown RBP4.68□□□□□ -1.66
SDCBP-207ENST00000520168 ATRQ13535 2644 aa4.68□□□□□ -1.66
SDCBP-207ENST00000520168 NSG1A0A0A6YYJ2 146 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 MGAT4DA6NG13 374 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 A6NHS1 94 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 BTN3A1O00481 513 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 DSCR3O14972 297 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 MATN3O15232 486 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 TTI1O43156 1089 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 NDUFB5O43674 189 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 KDM1AO60341 852 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ALOX12BO75342 701 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 MTX2O75431 263 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 POP7O75817 140 aaKnown RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 SLCO2B1O94956 709 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 IPO7O95373 1038 aaKnown RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 SERPINA7P05543 415 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 PRR35P0CG20 571 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 CCNCP24863 283 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 HMGCLP35914 325 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 SPAM1P38567 509 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 CD86P42081 329 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 CASP2P42575 452 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 NSG1P42857 185 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 PPP2R2BQ00005 443 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 FANCCQ00597 558 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ALDH6A1Q02252 535 aaKnown RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 OCA2Q04671 838 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 TFF3Q07654 80 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 TMED1Q13445 227 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 NFE2L1Q14494 772 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 SLC9A5Q14940 896 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 SLC14A2Q15849 920 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 IFI16Q16666 785 aaKnown RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 CA9Q16790 459 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 DPCR1Q3MIW9 517 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ATP13A5Q4VNC0 1218 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ATP13A4Q4VNC1 1196 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 BOLA3Q53S33 107 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF766Q5HY98 468 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 TCTE1Q5JU00 501 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ABHD17BQ5VST6 288 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 CCDC70Q6NSX1 233 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 HIBCHQ6NVY1 386 aaPredicted RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 DPY19L2P1Q6NXN4 242 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF449Q6P9G9 518 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 FBXO38Q6PIJ6 1188 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 CNSTQ6PJW8 725 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 AMIGO1Q86WK6 493 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ZDHHC13Q8IUH4 622 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ZNF655Q8N720 491 aaPredicted RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 HORMAD2Q8N7B1 307 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 TMEM178AQ8NBL3 297 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 SIMC1Q8NDZ2 872 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ACRBPQ8NEB7 543 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 DDHD1Q8NEL9 900 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 LILRB4Q8NHJ6 448 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 GOT1L1Q8NHS2 421 aaPredicted RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 ARRDC2Q8TBH0 407 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 BRIX1Q8TDN6 353 aaKnown RBP4.67□□□□□ -1.66
SDCBP-207ENST00000520168 EID2BQ96D98 161 aa4.67□□□□□ -1.66
SDCBP-207ENST00000520168 PPM1MQ96MI6 270 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms