RNA–Protein interactions for RNA: ENST00000519955.1

NPM1-206, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-206ENST00000519955 POLLQ9UGP5 575 aa4.81□□□□□ -1.64
NPM1-206ENST00000519955 WDR81Q562E7 1941 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 A0A1W2PPK0 400 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 CASTOR2A6NHX0 329 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 TSPY2A6NKD2 308 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 EIF5BO60841 1220 aaKnown RBP4.8□□□□□ -1.64
NPM1-206ENST00000519955 TRMUO75648 421 aaKnown RBP4.8□□□□□ -1.64
NPM1-206ENST00000519955 AP2A2O94973 939 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 PLGP00747 810 aaPredicted RBP4.8□□□□□ -1.64
NPM1-206ENST00000519955 TSPY3P0CV98 308 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 TSPY8P0CW00 308 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 MYL6BP14649 208 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 MAP2K2P36507 400 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 HSD17B3P37058 310 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 NPY4RP50391 375 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 GNB1P62873 340 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 TSPY1Q01534 308 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 TMEM30BQ3MIR4 351 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 C6orf136Q5SQH8 315 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 IL27RAQ6UWB1 636 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 ENPP7Q6UWV6 458 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 C11orf57Q6ZUT1 292 aaPredicted RBP4.8□□□□□ -1.64
NPM1-206ENST00000519955 VSIG1Q86XK7 387 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 RASGEF1AQ8N9B8 481 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 KBTBD8Q8NFY9 601 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 OR13C3Q8NGS6 347 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 SUSD6Q92537 303 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 DYRK2Q92630 601 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 PROX1Q92786 737 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 LRR1Q96L50 414 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 GBP5Q96PP8 586 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 RBM4Q9BWF3 364 aaKnown RBP4.8□□□□□ -1.64
NPM1-206ENST00000519955 ZMYND12Q9H0C1 365 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 TLE6Q9H808 572 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 XAB2Q9HCS7 855 aaKnown RBP4.8□□□□□ -1.64
NPM1-206ENST00000519955 CHST11Q9NPF2 352 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 GSN-AS1Q9NRJ2 163 aa4.8□□□□□ -1.64
NPM1-206ENST00000519955 INTS10Q9NVR2 710 aaKnown RBP4.8□□□□□ -1.64
NPM1-206ENST00000519955 TCF20Q9UGU0 1960 aaKnown RBP4.8□□□□□ -1.64
NPM1-206ENST00000519955 A0A087WV48 116 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 TRAV24A0A0B4J272 114 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 PSMD14O00487 310 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 RPS6KA5O75582 802 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 HSPA4LO95757 839 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 SCG2P13521 617 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 ACAT1P24752 427 aaKnown RBP4.79□□□□□ -1.64
NPM1-206ENST00000519955 VAMP7P51809 220 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 NR0B1P51843 470 aaKnown RBP4.79□□□□□ -1.64
NPM1-206ENST00000519955 CRIP2P52943 208 aaPredicted RBP4.79□□□□□ -1.64
NPM1-206ENST00000519955 CLDN15P56746 228 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 UBASH3AP57075 661 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 HERC3Q15034 1050 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 FFAR4Q5NUL3 377 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 ARHGAP11AQ6P4F7 1023 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 ZNF449Q6P9G9 518 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 ABI3BPQ7Z7G0 1075 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 KIRREL3Q8IZU9 778 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 NOA1Q8NC60 698 aaKnown RBP4.79□□□□□ -1.64
NPM1-206ENST00000519955 OR2T11Q8NH01 316 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 OR4C3Q8NH37 302 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 SETD6Q8TBK2 473 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 LITAFQ99732 161 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 MGME1Q9BQP7 344 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 SLC2A11Q9BYW1 496 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 DNAJC4Q9NNZ3 241 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 ZCCHC17Q9NP64 241 aaKnown RBP4.79□□□□□ -1.64
NPM1-206ENST00000519955 ZNF71Q9NQZ8 489 aaPredicted RBP4.79□□□□□ -1.64
NPM1-206ENST00000519955 DDX43Q9NXZ2 648 aaKnown RBP4.79□□□□□ -1.64
NPM1-206ENST00000519955 SNX7Q9UNH6 387 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 SMCHD1A6NHR9 2005 aa4.79□□□□□ -1.64
NPM1-206ENST00000519955 IGHV4-4A0A075B6R2 117 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 SNX3O60493 162 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 SOCS5O75159 536 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 GLRA3O75311 464 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 ATP6AP2O75787 350 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 CDC123O75794 336 aaPredicted RBP4.78□□□□□ -1.64
NPM1-206ENST00000519955 GPIP06744 558 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 HMBSP08397 361 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 GP1BBP13224 206 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 CEACAM1P13688 526 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 SP100P23497 879 aaPredicted RBP4.78□□□□□ -1.64
NPM1-206ENST00000519955 ITGA9Q13797 1035 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 XKR6Q5GH73 641 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 XKR3Q5GH77 459 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 OTUD3Q5T2D3 398 aaPredicted RBP4.78□□□□□ -1.64
NPM1-206ENST00000519955 OR4A47Q6IF82 309 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 SUSD1Q6UWL2 747 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 G2E3Q7L622 706 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 LSMEM2Q8N112 164 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 NIPA2Q8N8Q9 360 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 OR10Q1Q8NGQ4 319 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 C9orf43Q8TAL5 461 aaPredicted RBP4.78□□□□□ -1.64
NPM1-206ENST00000519955 KCNE4Q8WWG9 221 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 SPATA33Q96N06 139 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 FERMT1Q9BQL6 677 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 KRTAP2-2Q9BYT5 123 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 BARHL1Q9BZE3 327 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 PPANQ9NQ55 473 aaKnown RBP4.78□□□□□ -1.64
NPM1-206ENST00000519955 MAN1B1Q9UKM7 699 aa4.78□□□□□ -1.64
NPM1-206ENST00000519955 TNNQ9UQP3 1299 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms