RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 STOX2Q9P2F5 926 aaPredicted RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 DHCR7Q9UBM7 475 aaKnown RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 TRMT6Q9UJA5 497 aaKnown RBP12.79□□□□□ -0.36
VEGFA-219ENST00000518824 SERTAD3Q9UJW9 196 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 PCDHB3Q9Y5E6 796 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 COMMD10Q9Y6G5 202 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 HEATR5BQ9P2D3 2071 aa12.79□□□□□ -0.36
VEGFA-219ENST00000518824 LOC105369274A0A096LPK9 316 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 LOC102723532A0A0G2JNH3 316 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 E7ENX8 843 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 E7EQ34 232 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 KDM1AO60341 852 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 OR2B3O76000 313 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 CATP04040 527 aaKnown RBP12.78□□□□□ -0.36
VEGFA-219ENST00000518824 CCNYL3P0C7X3 344 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 FDXRP22570 491 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 IMPA1P29218 277 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 PNLIPRP1P54315 467 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 TAP2Q03519 686 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 IL10RAQ13651 578 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 FRG1Q14331 258 aaKnown RBP12.78□□□□□ -0.36
VEGFA-219ENST00000518824 PHKG1Q16816 387 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 FRMPD2BQ6IN97 320 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 CYB5D1Q6P9G0 228 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 KIAA0408Q6ZU52 694 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 UBE2R2Q712K3 238 aaPredicted RBP12.78□□□□□ -0.36
VEGFA-219ENST00000518824 GALNT7Q86SF2 657 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 ZC3HC1Q86WB0 502 aaKnown RBP12.78□□□□□ -0.36
VEGFA-219ENST00000518824 MCATQ8IVS2 390 aaKnown RBP12.78□□□□□ -0.36
VEGFA-219ENST00000518824 SYTL1Q8IYJ3 562 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 OR4N4Q8N0Y3 316 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 NOA1Q8NC60 698 aaKnown RBP12.78□□□□□ -0.36
VEGFA-219ENST00000518824 LINGO1Q96FE5 620 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 MCMBPQ9BTE3 642 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 RAB11FIP5Q9BXF6 653 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 CHRNA10Q9GZZ6 450 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 ACTL8Q9H568 366 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 SYTL2Q9HCH5 934 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 TAS2R13Q9NYV9 303 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 PLCL2Q9UPR0 1127 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 SH2B3Q9UQQ2 575 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 PDE10AQ9Y233 779 aa12.78□□□□□ -0.36
VEGFA-219ENST00000518824 CNOT3O75175 753 aaKnown RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 MT-ND3P03897 115 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 ENO3P13929 434 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 ITGAXP20702 1163 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 SAT1P21673 171 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 GMPRP36959 345 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 SKIV2L2P42285 1042 aaKnown RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 GCGRP47871 477 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 SNRPNP63162 240 aaKnown RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 CALCOCO2Q13137 446 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 SLC9A5Q14940 896 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 FBXO42Q6P3S6 717 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 STRA8Q7Z7C7 330 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 ZNF843Q8N446 348 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 ENDOVQ8N8Q3 282 aaKnown RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 FBXO15Q8NCQ5 510 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 BBOF1Q8ND07 529 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 MAGEC3Q8TD91 643 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 PYROXD1Q8WU10 500 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 N4BP2L2Q92802 583 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 SLC22A18Q96BI1 424 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 LRFN5Q96NI6 719 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 GBP5Q96PP8 586 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 SLC22A11Q9NSA0 550 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 CUEDC1Q9NWM3 386 aaPredicted RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 ZFATQ9P243 1243 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 TAC3Q9UHF0 121 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 VWA7Q9Y334 891 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 UTP11Q9Y3A2 253 aaKnown RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 PCDHGA6Q9Y5G7 932 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 MRFAP1Q9Y605 127 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 MDC1Q14676 2089 aaKnown RBP12.77□□□□□ -0.37
VEGFA-219ENST00000518824 PIEZO2Q9H5I5 2752 aa12.77□□□□□ -0.37
VEGFA-219ENST00000518824 A0A0J9YVX5 310 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 FAM95CA0A1B0GW59 222 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 CDC14CA4D256 554 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 OR2A25A4D2G3 310 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 ZSCAN9O15535 394 aaPredicted RBP12.76□□□□□ -0.37
VEGFA-219ENST00000518824 MAP3K7O43318 606 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 CREG1O75629 220 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 FAM155BO75949 473 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 ITGB2P05107 769 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 PTPN4P29074 926 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 TAS2R39P59534 338 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 CCDC25Q86WR0 208 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 CEP97Q8IW35 865 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 GPR135Q8IZ08 494 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 SMPDL3AQ92484 453 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 DPH7Q9BTV6 452 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 EFHD1Q9BUP0 239 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 UNKQ9C0B0 810 aaKnown RBP12.76□□□□□ -0.37
VEGFA-219ENST00000518824 CAB39LQ9H9S4 337 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 FAM114A2Q9NRY5 505 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 ZDHHC18Q9NUE0 388 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 IRAK4Q9NWZ3 460 aa12.76□□□□□ -0.37
VEGFA-219ENST00000518824 DMGDHQ9UI17 866 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms