RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 SNX7Q9UNH6 387 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 APOBEC2Q9Y235 224 aaKnown RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 VPS13AQ96RL7 3174 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 PIEZO1Q92508 2521 aa9.16□□□□□ -0.94
CLN8-203ENST00000518780 COL5A1P20908 1838 aaPredicted RBP9.16□□□□□ -0.94
CLN8-203ENST00000518780 WDR87Q6ZQQ6 2873 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 DMDP11532 3685 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 MN1Q10571 1320 aaPredicted RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 A0A1W2PPV9 198 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 TLCD2A6NGC4 264 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 NCF1BA6NI72 391 aaPredicted RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 NCF1CA8MVU1 366 aaPredicted RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 ISM1B1AKI9 464 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 CAPN5O15484 640 aaPredicted RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 TAPBPO15533 448 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 UGDHO60701 494 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 DKK1O94907 266 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 MLYCDO95822 493 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 RPLP0P05388 317 aaKnown RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 BPGMP07738 259 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 ANKRD34CP0C6C1 535 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 NCF1P14598 390 aaPredicted RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 EPB42P16452 691 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 NPPBP16860 134 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 TYRP1P17643 537 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 GRK2P25098 689 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 PRDX3P30048 256 aaKnown RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 CMPK1P30085 196 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 PLA2G5P39877 138 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 SERPINB4P48594 390 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 TBPL1P62380 186 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 MPP2Q14168 576 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 SF1Q15637 639 aaKnown RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 PERM1Q5SV97 790 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 THEMIS2Q5TEJ8 643 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 HHATQ5VTY9 493 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 PRAMEF13Q5VWM6 474 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 SPESP1Q6UW49 350 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 THOC6Q86W42 341 aaKnown RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 C17orf64Q86WR6 236 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 NUDCD3Q8IVD9 361 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 SPNS2Q8IVW8 549 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 KIRREL3Q8IZU9 778 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 CHCHD4Q8N4Q1 142 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 Q8N9G6 341 aaPredicted RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 OR2A1Q8NGT9 310 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 PPP4R1Q8TF05 950 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 NCSTNQ92542 709 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 PHF21BQ96EK2 531 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 MED8Q96G25 268 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 TMEM74Q96NL1 305 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 IL17FQ96PD4 163 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 OR2A14Q96R47 310 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 GFM1Q96RP9 751 aaKnown RBP9.15□□□□□ -0.94
CLN8-203ENST00000518780 TMEM79Q9BSE2 394 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 PITPNM3Q9BZ71 974 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 ATG10Q9H0Y0 220 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 SEMA6CQ9H3T2 930 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 EHD1Q9H4M9 534 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 OGFRQ9NZT2 677 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 SLC17A7Q9P2U7 560 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 PLAGL1Q9UM63 463 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 DYRK1BQ9Y463 629 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 ANGPTL3Q9Y5C1 460 aa9.15□□□□□ -0.94
CLN8-203ENST00000518780 MYO15AQ9UKN7 3530 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 A0A0J9YY10 115 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 A0A1W2PQM1 296 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 GSAPA4D1B5 854 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 CLGNO14967 610 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 CCNT2O60583 730 aaKnown RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 WDR47O94967 919 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 ZBTB11O95625 1053 aaPredicted RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 RPS17P08708 135 aaKnown RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 MYF5P13349 255 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 UGT2B7P16662 529 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 POLR2CP19387 275 aaPredicted RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 NR1D1P20393 614 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 CXCR2P25025 360 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 GSTM2P28161 218 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 EEF1DP29692 281 aaKnown RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 HPDP32754 393 aaPredicted RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 CASP2P42575 452 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 HSPA7P48741 367 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 PPM1FP49593 454 aaPredicted RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 CCL7P80098 99 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 GALNT1Q10472 559 aaPredicted RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 CDC16Q13042 620 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 LAPTM5Q13571 262 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 SPIDRQ14159 915 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 E2F2Q14209 437 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 FASTKQ14296 549 aaKnown RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 PCLAFQ15004 111 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 TBCCQ15814 346 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 PDK4Q16654 411 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 ZXDCQ2QGD7 858 aaPredicted RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 AMZ1Q400G9 498 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 CFAP157Q5JU67 520 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 ZNF678Q5SXM1 525 aa9.14□□□□□ -0.95
CLN8-203ENST00000518780 C10orf62Q5T681 223 aaPredicted RBP9.14□□□□□ -0.95
CLN8-203ENST00000518780 ICE2Q659A1 982 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms