RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 RAB10P61026 200 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 TSTA3Q13630 321 aaPredicted RBP21.16■□□□□ 0.98
VEGFA-217ENST00000518538 NAA25Q14CX7 972 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 FIGLAQ6QHK4 219 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 SBSNQ6UWP8 590 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 TRMT10CQ7L0Y3 403 aaKnown RBP21.16■□□□□ 0.98
VEGFA-217ENST00000518538 NLGN4XQ8N0W4 816 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 DNAJC22Q8N4W6 341 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 NLGN4YQ8NFZ3 816 aaPredicted RBP21.16■□□□□ 0.98
VEGFA-217ENST00000518538 HNRNPLLQ8WVV9 542 aaKnown RBP21.16■□□□□ 0.98
VEGFA-217ENST00000518538 NKD1Q969G9 470 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 ZUFSPQ96AP4 578 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 DERL2Q9GZP9 239 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 TAC3Q9UHF0 121 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 SERTAD3Q9UJW9 196 aa21.16■□□□□ 0.98
VEGFA-217ENST00000518538 USP24Q9UPU5 2620 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 A0A087WUV0 522 aaPredicted RBP21.15■□□□□ 0.98
VEGFA-217ENST00000518538 TARM1B6A8C7 271 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 CCNDBP1O95273 360 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 FAM153BP0C7A2 387 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 TNFRSF8P28908 595 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 GRIA3P42263 894 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 FAM153CQ494X1 144 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 FCRL6Q6DN72 434 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 MBOAT1Q6ZNC8 495 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 TIPARPQ7Z3E1 657 aaKnown RBP21.15■□□□□ 0.98
VEGFA-217ENST00000518538 TMEM126BQ8IUX1 230 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 CACNA2D3Q8IZS8 1091 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 OR1L3Q8NH93 324 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 N4BP2L2Q92802 583 aaPredicted RBP21.15■□□□□ 0.98
VEGFA-217ENST00000518538 MRRFQ96E11 262 aaKnown RBP21.15■□□□□ 0.98
VEGFA-217ENST00000518538 ACAT2Q9BWD1 397 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 ARL15Q9NXU5 204 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 PLCL2Q9UPR0 1127 aa21.15■□□□□ 0.98
VEGFA-217ENST00000518538 NPEPPSL1A6NEC2 478 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 CDC7O00311 574 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 SCRG1O75711 98 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 ABHD2P08910 425 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 PMS2P54278 862 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 UCNP55089 124 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 ITGA1P56199 1179 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 UAP1Q16222 522 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-217ENST00000518538 PPP1R3AQ16821 1122 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 DEFB110Q30KQ9 67 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 AGTRAPQ6RW13 159 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 C6orf15Q6UXA7 325 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-217ENST00000518538 ADAMTSL2Q86TH1 951 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 GSPT2Q8IYD1 628 aaKnown RBP21.14■□□□□ 0.97
VEGFA-217ENST00000518538 ESX1Q8N693 406 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 SLC44A1Q8WWI5 657 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 CCNL2Q96S94 520 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-217ENST00000518538 TXLNGYQ9BZA5 131 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 MRPS30Q9NP92 439 aaKnown RBP21.14■□□□□ 0.97
VEGFA-217ENST00000518538 CCDC177Q9NQR7 707 aaPredicted RBP21.14■□□□□ 0.97
VEGFA-217ENST00000518538 WDR70Q9NW82 654 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 CTNNAL1Q9UBT7 734 aa21.14■□□□□ 0.97
VEGFA-217ENST00000518538 HCRTR1O43613 425 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 CPNE3O75131 537 aaKnown RBP21.13■□□□□ 0.97
VEGFA-217ENST00000518538 SLU7O95391 586 aaKnown RBP21.13■□□□□ 0.97
VEGFA-217ENST00000518538 MT-ND3P03897 115 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 INHBAP08476 426 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 CCDC166P0CW27 439 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 CRABP2P29373 138 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 TBPL1P62380 186 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 ABATP80404 500 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 PRDX1Q06830 199 aaKnown RBP21.13■□□□□ 0.97
VEGFA-217ENST00000518538 ZC3H12BQ5HYM0 836 aaKnown RBP21.13■□□□□ 0.97
VEGFA-217ENST00000518538 MANEAQ5SRI9 462 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 MROH9Q5TGP6 573 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 ICE2Q659A1 982 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 RAPH1Q70E73 1250 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 CMC1Q7Z7K0 106 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 IL22RA1Q8N6P7 574 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 GALNT6Q8NCL4 622 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 ATL1Q8WXF7 558 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 FBXL8Q96CD0 374 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 RNF31Q96EP0 1072 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 PAFAH2Q99487 392 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 PCBD2Q9H0N5 130 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 ANKZF1Q9H8Y5 726 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 SLC6A20Q9NP91 592 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 ANKMY1Q9P2S6 941 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 OARD1Q9Y530 152 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 PCDHB3Q9Y5E6 796 aa21.13■□□□□ 0.97
VEGFA-217ENST00000518538 TEX51A0A1B0GUA7 166 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 HMX2A2RU54 273 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 E7EQ34 232 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 RIPK2O43353 540 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 SNRNP200O75643 2136 aaKnown RBP21.12■□□□□ 0.97
VEGFA-217ENST00000518538 SLC35E2BP0CK96 405 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 MYBL2P10244 700 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 CCND1P24385 295 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 ATP6V0D1P61421 351 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 YBX1P67809 324 aaKnown RBP21.12■□□□□ 0.97
VEGFA-217ENST00000518538 CDKL1Q00532 357 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 ABHD18Q0P651 414 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 BMPR2Q13873 1038 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 THEMIS2Q5TEJ8 643 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 C19orf48Q6RUI8 117 aa21.12■□□□□ 0.97
VEGFA-217ENST00000518538 CCDC91Q7Z6B0 441 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms