RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 C3orf18Q9UK00 162 aa15.05■□□□□ -0
LMNA-223ENST00000515459 F8P00451 2351 aa15.04■□□□□ -0
LMNA-223ENST00000515459 NSG1A0A0A6YYJ2 146 aa15.04■□□□□ -0
LMNA-223ENST00000515459 HYKKA2RU49 373 aa15.04■□□□□ -0
LMNA-223ENST00000515459 CCDC162PA2VCL2 907 aa15.04■□□□□ -0
LMNA-223ENST00000515459 TARM1B6A8C7 271 aa15.04■□□□□ -0
LMNA-223ENST00000515459 CCL21O00585 134 aa15.04■□□□□ -0
LMNA-223ENST00000515459 OR1I1O60431 355 aa15.04■□□□□ -0
LMNA-223ENST00000515459 ZGLP1P0C6A0 271 aa15.04■□□□□ -0
LMNA-223ENST00000515459 PRR35P0CG20 571 aa15.04■□□□□ -0
LMNA-223ENST00000515459 FDXRP22570 491 aa15.04■□□□□ -0
LMNA-223ENST00000515459 HTR1EP28566 365 aa15.04■□□□□ -0
LMNA-223ENST00000515459 CCR7P32248 378 aa15.04■□□□□ -0
LMNA-223ENST00000515459 CTNNA1P35221 906 aaKnown RBP15.04■□□□□ -0
LMNA-223ENST00000515459 PTPN7P35236 360 aa15.04■□□□□ -0
LMNA-223ENST00000515459 SOX11P35716 441 aa15.04■□□□□ -0
LMNA-223ENST00000515459 VSX2P58304 361 aaPredicted RBP15.04■□□□□ -0
LMNA-223ENST00000515459 GRB7Q14451 532 aa15.04■□□□□ -0
LMNA-223ENST00000515459 ZNF630Q2M218 657 aaPredicted RBP15.04■□□□□ -0
LMNA-223ENST00000515459 ATG9BQ674R7 924 aa15.04■□□□□ -0
LMNA-223ENST00000515459 PRMT9Q6P2P2 845 aa15.04■□□□□ -0
LMNA-223ENST00000515459 UNC5DQ6UXZ4 953 aa15.04■□□□□ -0
LMNA-223ENST00000515459 NDUFAF7Q7L592 441 aa15.04■□□□□ -0
LMNA-223ENST00000515459 VRK3Q8IV63 474 aa15.04■□□□□ -0
LMNA-223ENST00000515459 CNGA4Q8IV77 575 aa15.04■□□□□ -0
LMNA-223ENST00000515459 PRSS58Q8IYP2 241 aa15.04■□□□□ -0
LMNA-223ENST00000515459 DTWD1Q8N5C7 304 aa15.04■□□□□ -0
LMNA-223ENST00000515459 ASZ1Q8WWH4 475 aa15.04■□□□□ -0
LMNA-223ENST00000515459 PSMF1Q92530 271 aa15.04■□□□□ -0
LMNA-223ENST00000515459 TSSK1BQ9BXA7 367 aa15.04■□□□□ -0
LMNA-223ENST00000515459 PIH1D1Q9NWS0 290 aaKnown RBP15.04■□□□□ -0
LMNA-223ENST00000515459 PLA2G3Q9NZ20 509 aa15.04■□□□□ -0
LMNA-223ENST00000515459 SLC39A10Q9ULF5 831 aa15.04■□□□□ -0
LMNA-223ENST00000515459 PCDHA3Q9Y5H8 950 aa15.04■□□□□ -0
LMNA-223ENST00000515459 FAM169AQ9Y6X4 670 aa15.04■□□□□ -0
LMNA-223ENST00000515459 CSMD2Q7Z408 3487 aa15.04■□□□□ -0
LMNA-223ENST00000515459 POLQO75417 2590 aa15.04■□□□□ -0
LMNA-223ENST00000515459 CPAMD8Q8IZJ3 1885 aa15.03■□□□□ -0
LMNA-223ENST00000515459 RASGRF2O14827 1237 aa15.03■□□□□ -0
LMNA-223ENST00000515459 CTSVO60911 334 aa15.03■□□□□ -0
LMNA-223ENST00000515459 TJP3O95049 919 aa15.03■□□□□ -0
LMNA-223ENST00000515459 UNC5CO95185 931 aa15.03■□□□□ -0
LMNA-223ENST00000515459 METTL18O95568 372 aa15.03■□□□□ -0
LMNA-223ENST00000515459 SNRPB2P08579 225 aaKnown RBP15.03■□□□□ -0
LMNA-223ENST00000515459 COX6B1P14854 86 aa15.03■□□□□ -0
LMNA-223ENST00000515459 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.03■□□□□ -08e-15■■■■□ 20.1
LMNA-223ENST00000515459 P3H1Q32P28 736 aa15.03■□□□□ -0
LMNA-223ENST00000515459 VWA2Q5GFL6 755 aa15.03■□□□□ -0
LMNA-223ENST00000515459 BRIX1Q8TDN6 353 aaKnown RBP15.03■□□□□ -0
LMNA-223ENST00000515459 RAB11FIP5Q9BXF6 653 aa15.03■□□□□ -0
LMNA-223ENST00000515459 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.03■□□□□ -0
LMNA-223ENST00000515459 ZC3H7BQ9UGR2 993 aaKnown RBP15.03■□□□□ -0
LMNA-223ENST00000515459 TFR2Q9UP52 801 aa15.03■□□□□ -0
LMNA-223ENST00000515459 MRPS2Q9Y399 296 aaKnown RBP15.03■□□□□ -0
LMNA-223ENST00000515459 IGLV3-12A0A075B6K2 115 aa15.02■□□□□ -0
LMNA-223ENST00000515459 PSMD3O43242 534 aa15.02■□□□□ -0
LMNA-223ENST00000515459 PRICKLE3O43900 615 aaPredicted RBP15.02■□□□□ -0
LMNA-223ENST00000515459 GPC4O75487 556 aa15.02■□□□□ -0
LMNA-223ENST00000515459 MED26O95402 600 aa15.02■□□□□ -0
LMNA-223ENST00000515459 CRYABP02511 175 aaKnown RBP15.02■□□□□ -0
LMNA-223ENST00000515459 SERPINA7P05543 415 aa15.02■□□□□ -0
LMNA-223ENST00000515459 APOA4P06727 396 aa15.02■□□□□ -0
LMNA-223ENST00000515459 UQCRHP07919 91 aa15.02■□□□□ -0
LMNA-223ENST00000515459 COX6A1P12074 109 aa15.02■□□□□ -0
LMNA-223ENST00000515459 CXCR2P25025 360 aa15.02■□□□□ -0
LMNA-223ENST00000515459 CETN2P41208 172 aa15.02■□□□□ -0
LMNA-223ENST00000515459 CA7P43166 264 aa15.02■□□□□ -0
LMNA-223ENST00000515459 CCDC38Q502W7 563 aa15.02■□□□□ -0
LMNA-223ENST00000515459 FRMPD2BQ6IN97 320 aa15.02■□□□□ -0
LMNA-223ENST00000515459 TTC23LQ6PF05 361 aa15.02■□□□□ -0
LMNA-223ENST00000515459 CNSTQ6PJW8 725 aa15.02■□□□□ -0
LMNA-223ENST00000515459 RPTNQ6XPR3 784 aa15.02■□□□□ -0
LMNA-223ENST00000515459 LINC00523Q86TU6 105 aa15.02■□□□□ -0
LMNA-223ENST00000515459 SIRT6Q8N6T7 355 aa15.02■□□□□ -0
LMNA-223ENST00000515459 FAM71DQ8N9W8 422 aa15.02■□□□□ -0
LMNA-223ENST00000515459 CARD6Q9BX69 1037 aa15.02■□□□□ -0
LMNA-223ENST00000515459 ABI3Q9P2A4 366 aa15.02■□□□□ -0
LMNA-223ENST00000515459 SEC14L3Q9UDX4 400 aa15.02■□□□□ -0
LMNA-223ENST00000515459 LOC105369274A0A096LPK9 316 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 LOC102723532A0A0G2JNH3 316 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 A0A0J9YVX5 310 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 WFS1O76024 890 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 RASAL1O95294 804 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 BMP10O95393 424 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 F10P00742 488 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 EIF2S1P05198 315 aaKnown RBP15.01□□□□□ -0.01
LMNA-223ENST00000515459 FBLP22087 321 aaKnown RBP15.01□□□□□ -0.01
LMNA-223ENST00000515459 PPARGP37231 505 aaPredicted RBP15.01□□□□□ -0.01
LMNA-223ENST00000515459 RWDD2BP57060 319 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 MUM1Q2TAK8 710 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 AFTPHQ6ULP2 937 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 RIPOR1Q6ZS17 1223 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 LAPTM4BQ86VI4 370 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 OR4N4Q8N0Y3 316 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 OR13J1Q8NGT2 312 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 DNAJB8Q8NHS0 232 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 SUN3Q8TAQ9 357 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 HDAC10Q969S8 669 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 RAD51AP1Q96B01 352 aa15.01□□□□□ -0.01
LMNA-223ENST00000515459 SH3BGRL2Q9UJC5 107 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms