RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 M0QZ92 97 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 B4GALT3O60512 393 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF623O75123 536 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF780AO75290 641 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 RAB3DO95716 219 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 F9P00740 461 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 SERPINA6P08185 405 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 MBL2P11226 248 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 TNNI3P19429 210 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 CD52P31358 61 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 HMGCLP35914 325 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 PSMD4P55036 377 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 NKX3-2P78367 333 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 BAMBIQ13145 260 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 MRPL58Q14197 206 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 SWI5Q1ZZU3 235 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 AASDHQ4L235 1098 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 RUNDC3AQ59EK9 446 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 Q5BKY6 102 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 GNASQ5JWF2 1037 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 OGFRL1Q5TC84 451 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 MANEALQ5VSG8 457 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 FAM171A1Q5VUB5 890 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ZNF544Q6NX49 715 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 GPRIN3Q6ZVF9 776 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 C12orf40Q86WS4 652 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 PRSS58Q8IYP2 241 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 PRR18Q8N4B5 295 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 TMEM151AQ8N4L1 468 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 AKR7LQ8NHP1 331 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 SCAMP5Q8TAC9 235 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 HASPINQ8TF76 798 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 SGTBQ96EQ0 304 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 CELF6Q96J87 481 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 RIPOR3Q96MK2 946 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 APOL2Q9BQE5 337 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 UCK2Q9BZX2 261 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 PACSIN3Q9UKS6 424 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 PADI3Q9ULW8 664 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 SORCS3Q9UPU3 1222 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 VPS9D1Q9Y2B5 631 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 CHD5Q8TDI0 1954 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 MANSC4A6NHS7 340 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ERI2A8K979 691 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 PER2O15055 1255 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 CIDEAO60543 219 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ZMPSTE24O75844 475 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 NDST3O95803 873 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 QDPRP09417 244 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ODC1P11926 461 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ITGB6P18564 788 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 TFEBP19484 476 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 NMBRP28336 390 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 CPOXP36551 454 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 GATMP50440 423 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 PGGT1BP53609 377 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 SLC25A3Q00325 362 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ARMC6Q6NXE6 501 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 C11orf88Q6PI97 169 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 NAPRTQ6XQN6 538 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 METTL4Q8N3J2 472 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 GLB1L3Q8NCI6 653 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 CCDC124Q96CT7 223 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 OSBPL2Q9H1P3 480 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 CCDC86Q9H6F5 360 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 PNPOQ9NVS9 261 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 B3GNT2Q9NY97 397 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ZMYM5Q9UJ78 669 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 ADAM28Q9UKQ2 775 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 TRHDEQ9UKU6 1024 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 SCML1Q9UN30 329 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 GBF1Q92538 1859 aa7.3□□□□□ -1.24
PDLIM5-219ENST00000514743 LOC100653049A0A140TA62 436 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 IRAK2O43187 625 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 HS6ST1O60243 411 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PIAS2O75928 621 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 KRT34O76011 436 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 LDOC1O95751 146 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 WDPCPO95876 746 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 SERPINE1P05121 402 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 SBK3P0C264 359 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 CYP2A6P11509 494 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 AOC1P19801 751 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 CHMP24386 653 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 POU1F1P28069 291 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PCSK1P29120 753 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 HTR3AP46098 478 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 EPHB1P54762 984 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 CRHR2Q13324 411 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 SMAD2Q15796 467 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 DNAL1Q4LDG9 190 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PAN3Q58A45 887 aaKnown RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 TMEM31Q5JXX7 168 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 AGAP6Q5VW22 663 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 RAET1GQ6H3X3 334 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 KIAA0408Q6ZU52 694 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 PDZD4Q76G19 769 aaPredicted RBP7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 SPATC1Q76KD6 591 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 MFSD2AQ8NA29 543 aa7.29□□□□□ -1.24
PDLIM5-219ENST00000514743 OR9A1PQ8NGU1 263 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms