RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 CCDC74BQ96LY2 380 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 ZNF578Q96N58 590 aaPredicted RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 FOPNLQ96NB1 174 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 AARSD1Q9BTE6 412 aaKnown RBP8.07□□□□□ -1.12
CCL28-204ENST00000514421 MECRQ9BV79 373 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 TRIM55Q9BYV6 548 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 SRMSQ9H3Y6 488 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 POPDC3Q9HBV1 291 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 TMEM9Q9P0T7 183 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 GALPQ9UBC7 116 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 MID2Q9UJV3 735 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 VWA7Q9Y334 891 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 DHRS7Q9Y394 339 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 LOXL2Q9Y4K0 774 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 PIKFYVEQ9Y2I7 2098 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 PLXNB3Q9ULL4 1909 aa8.07□□□□□ -1.12
CCL28-204ENST00000514421 FAM95CA0A1B0GW59 222 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 CCDC189A1A4V9 331 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 WDR91A4D1P6 747 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 OR6C74A6NCV1 312 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 OR5K3A6NET4 321 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 BRINP1O60477 761 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 ATP5HO75947 161 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 KLHL2O95198 593 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 RPN2P04844 631 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 SBK3P0C264 359 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 JMJD7P0C870 316 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 CPA3P15088 417 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 CLCN7P51798 805 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 HK2P52789 917 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 ERVPABLB-1P60509 514 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 STX3Q13277 289 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 GBX1Q14549 363 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 CHI3L2Q15782 390 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 TSNAXIP1Q2TAA8 658 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 TMEM164Q5U3C3 297 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 CACHD1Q5VU97 1274 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 IRGCQ6NXR0 463 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 ZYG11AQ6WRX3 759 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 NEK10Q6ZWH5 1172 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 ASRGL1Q7L266 308 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 AMIGO1Q86WK6 493 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 RCBTB1Q8NDN9 531 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 OR5AR1Q8NGP9 310 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 MAGEC3Q8TD91 643 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 SKA2Q8WVK7 121 aaPredicted RBP8.06□□□□□ -1.12
CCL28-204ENST00000514421 RSC1A1Q92681 617 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 FGF11Q92914 225 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 RAD51AP1Q96B01 352 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 FAM136AQ96C01 138 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 TGM7Q96PF1 710 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 LRRC37BQ96QE4 947 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 CD180Q99467 661 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 B3GNT4Q9C0J1 378 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 C20orf27Q9GZN8 174 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 MYLK2Q9H1R3 596 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 CAB39LQ9H9S4 337 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 NMRAL1Q9HBL8 299 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 SAR1AQ9NR31 198 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 OXSMQ9NWU1 459 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 OR6C2Q9NZP2 312 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 SEMA5BQ9P283 1151 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 PISDQ9UG56 409 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 KLHL3Q9UH77 587 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 TDRKHQ9Y2W6 561 aaKnown RBP8.06□□□□□ -1.12
CCL28-204ENST00000514421 ACOT9Q9Y305 439 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 ZFC3H1O60293 1989 aaKnown RBP8.06□□□□□ -1.12
CCL28-204ENST00000514421 PTPRBP23467 1997 aa8.06□□□□□ -1.12
CCL28-204ENST00000514421 MN1Q10571 1320 aaPredicted RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 EPG5Q9HCE0 2579 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 CFAP73A6NFT4 308 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 EFCAB7A8K855 629 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TMEM114B3SHH9 223 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 B4E171 279 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TAF4O00268 1085 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 EIF3FO00303 357 aaPredicted RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 MATN2O00339 956 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 BTN3A3O00478 584 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 NVLO15381 856 aaKnown RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 KIF1CO43896 1103 aaKnown RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 HNRNPCL1O60812 293 aaKnown RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 VPS26AO75436 327 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 UBOX5O94941 541 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 UNC5CO95185 931 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 MATN4O95460 622 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 F7P08709 466 aaPredicted RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 ANKRD34CP0C6C1 535 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TPBGLP0DKB5 382 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 MPC1LP0DKB6 136 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 CBSLP0DN79 551 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 CCL4P13236 92 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 ENO3P13929 434 aaPredicted RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 HGFP14210 728 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 STMN1P16949 149 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 POLR2CP19387 275 aaPredicted RBP8.05□□□□□ -1.12
CCL28-204ENST00000514421 SHMT2P34897 504 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 CBSP35520 551 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 SERPINB5P36952 375 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 TSPAN7P41732 249 aa8.05□□□□□ -1.12
CCL28-204ENST00000514421 MAPK10P53779 464 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms