RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 PRSS22Q9GZN4 317 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 VPS16Q9H269 839 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 THAP9Q9H5L6 903 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 MAGEF1Q9HAY2 307 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 TMEM8AQ9HCN3 771 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 LHX9Q9NQ69 397 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RAB20Q9NX57 234 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 RRN3Q9NYV6 651 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC23A1Q9UHI7 598 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 XPO7Q9UIA9 1087 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 FBXO2Q9UK22 296 aaPredicted RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 B3GNT3Q9Y2A9 372 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 MRPS18BQ9Y676 258 aaKnown RBP3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 CROCCQ5TZA2 2017 aa3.6□□□□□ -1.83
PDLIM5-218ENST00000513341 ZGRF1Q86YA3 2104 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NBEAL1Q6ZS30 2694 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 A0A0D9SEW6 157 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 B4DGG1 531 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 RASA4BC9J798 803 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 RASA4O43374 803 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 CALUO43852 315 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 SNAP91O60641 907 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 ZG16O60844 167 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 URI1O94763 535 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NADKO95544 446 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 IGHEP01854 428 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NR3C1P04150 777 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 RAP2AP10114 183 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 KRT13P13646 458 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 CD19P15391 556 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 DDCP20711 480 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 AGAP20933 346 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 DRD4P21917 467 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 GATA3P23771 443 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 TBXAS1P24557 533 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 PTPN4P29074 926 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 OR1E1P30953 314 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 CASP14P31944 242 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 PSMC2P35998 433 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 GCLMP48507 274 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 SERPINH1P50454 418 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 DNA2P51530 1060 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 SOX8P57073 446 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 CTXN1P60606 82 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NOMO3P69849 1222 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 IRF4Q15306 451 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 UGP2Q16851 508 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 C3orf36Q3SXR2 165 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 PRR30Q53SZ7 412 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 INO80DQ53TQ3 878 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 PXDC1Q5TGL8 231 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 LYPLAL1Q5VWZ2 237 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NKAIN2Q5VXU1 208 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 FCRL6Q6DN72 434 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 ZNF529Q6P280 563 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 XKRXQ6PP77 449 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 LINGO4Q6UY18 593 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 GDPD4Q6W3E5 623 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 Q6ZS92 163 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 CLNKQ7Z7G1 428 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 TMEM110Q86TL2 294 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 TAC4Q86UU9 113 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NRROSQ86YC3 692 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 SFTPA2Q8IWL1 248 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NELFCDQ8IXH7 590 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NAGSQ8N159 534 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 ARFGAP1Q8N6T3 406 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 IQUBQ8NA54 791 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 AVL9Q8NBF6 648 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 C3orf20Q8ND61 904 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 CHDHQ8NE62 594 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC30A5Q8TAD4 765 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 SLC35G2Q8TBE7 412 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 CCHCR1Q8TD31 782 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 NSMCE1Q8WV22 266 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 OR1E3Q8WZA6 343 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 TM9SF4Q92544 642 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 FAM149B1Q96BN6 582 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 STAMBPL1Q96FJ0 436 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 EEF2KMTQ96G04 330 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 PDXPQ96GD0 296 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 KLHL32Q96NJ5 620 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 IP6K3Q96PC2 410 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 CTRCQ99895 268 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 GTPBP4Q9BZE4 634 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 ULBP3Q9BZM4 244 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 SPRTNQ9H040 489 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 ZSCAN16Q9H4T2 348 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 ZDHHC6Q9H6R6 413 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 MCCC2Q9HCC0 563 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 APMAPQ9HDC9 416 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 KLC4Q9NSK0 619 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 ASNSD1Q9NWL6 643 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 SIDT1Q9NXL6 827 aaKnown RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 GPR83Q9NYM4 423 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 TAAR2Q9P1P5 351 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 AJAP1Q9UKB5 411 aaPredicted RBP3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 VANGL2Q9ULK5 521 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 TRAF3IP3Q9Y228 551 aa3.59□□□□□ -1.83
PDLIM5-218ENST00000513341 OSGIN2Q9Y236 505 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms