RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 PIP5K1BO14986 540 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 UGDHO60701 494 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 DIAPH2O60879 1101 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 KATNA1O75449 491 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 CLDN9O95484 217 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 PRR35P0CG20 571 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 HGFP14210 728 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 XRCC1P18887 633 aaPredicted RBP9.04□□□□□ -0.96
DHFR-206ENST00000513048 NDUFS1P28331 727 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 EPHA3P29320 983 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 PEBP1P30086 187 aaKnown RBP9.04□□□□□ -0.96
DHFR-206ENST00000513048 DHPSP49366 369 aaPredicted RBP9.04□□□□□ -0.96
DHFR-206ENST00000513048 RAB28P51157 221 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 CHIT1Q13231 466 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 DOC2AQ14183 400 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 SHBQ15464 509 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 TBCCQ15814 346 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 ZSCAN26Q16670 478 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 KIF19Q2TAC6 998 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 LSM12Q3MHD2 195 aaKnown RBP9.04□□□□□ -0.96
DHFR-206ENST00000513048 PRRT3Q5FWE3 981 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 PRAMEF14Q5SWL7 426 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 FAM91A1Q658Y4 838 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 SUSD1Q6UWL2 747 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 LCTLQ6UWM7 567 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 CHSY3Q70JA7 882 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 LARP4Q71RC2 724 aaKnown RBP eCLIP9.04□□□□□ -0.96
DHFR-206ENST00000513048 TRPM8Q7Z2W7 1104 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 TAF8Q7Z7C8 310 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 C17orf82Q86X59 251 aaPredicted RBP9.04□□□□□ -0.96
DHFR-206ENST00000513048 SFRP1Q8N474 314 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 AFAP1L2Q8N4X5 818 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 ZNF548Q8NEK5 533 aaPredicted RBP9.04□□□□□ -0.96
DHFR-206ENST00000513048 OR2T11Q8NH01 316 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 ACTRT2Q8TDY3 377 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 ZFPM2Q8WW38 1151 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 SMPDL3AQ92484 453 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 CCT6BQ92526 530 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 USP7Q93009 1102 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 NEIL2Q969S2 332 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 C19orf60Q96EN9 201 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 XKR8Q9H6D3 395 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 ERVMER34-1Q9H9K5 563 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 SLC40A1Q9NP59 571 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 CCDC177Q9NQR7 707 aaPredicted RBP9.04□□□□□ -0.96
DHFR-206ENST00000513048 ZSCAN32Q9NX65 697 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 BTRCQ9Y297 605 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 COLEC10Q9Y6Z7 277 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 SDK1Q7Z5N4 2213 aa9.04□□□□□ -0.96
DHFR-206ENST00000513048 TRBV23OR9-2A0A075B6M9 112 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 KIR2DS5A0A0G2JLQ3 304 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 A0A0G2JNG1 304 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 SERTM1A2A2V5 107 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 OR5K4A6NMS3 321 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 PRR5-ARHGAP8B1AHC4 643 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 KIR2DS3K7RE56 304 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 MANBAO00462 879 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 EBAG9O00559 213 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 FCHO1O14526 889 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 YY2O15391 372 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 PIAS2O75928 621 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 DCTN3O75935 186 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 SERPINA6P08185 405 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 LINC00032P0C843 101 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 GIMD1P0DJR0 217 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 CTSEP14091 401 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 JUPP14923 745 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 CCND1P24385 295 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 VARSP26640 1264 aaKnown RBP9.03□□□□□ -0.96
DHFR-206ENST00000513048 CNR2P34972 360 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 RXRGP48443 463 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 C21orf59P57076 290 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 YBX1P67809 324 aaKnown RBP9.03□□□□□ -0.96
DHFR-206ENST00000513048 IFT88Q13099 833 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 KIR2DS5Q14953 304 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 ABRAXAS2Q15018 415 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 ZNF423Q2M1K9 1284 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 SPRED3Q2MJR0 410 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 GALNTL6Q49A17 601 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 CATSPEREQ5SY80 951 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 PRAMEF13Q5VWM6 474 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 METTL21CQ5VZV1 264 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 LIPJQ5W064 366 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 GRHL2Q6ISB3 625 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 OGFOD3Q6PK18 319 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 Q6ZSR9 355 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 EFL1Q7Z2Z2 1120 aaKnown RBP9.03□□□□□ -0.96
DHFR-206ENST00000513048 TRIM46Q7Z4K8 759 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 MTDHQ86UE4 582 aaKnown RBP9.03□□□□□ -0.96
DHFR-206ENST00000513048 FAM129CQ86XR2 697 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 C2orf73Q8N5S3 287 aaPredicted RBP9.03□□□□□ -0.96
DHFR-206ENST00000513048 OR2A1Q8NGT9 310 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 FLVCR1-AS1Q8TAF5 88 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 WDR20Q8TBZ3 569 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 METTL6Q8TCB7 284 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 LMX1AQ8TE12 382 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 SLC37A2Q8TED4 501 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 JPH3Q8WXH2 748 aaPredicted RBP9.03□□□□□ -0.96
DHFR-206ENST00000513048 ATP6V1E2Q96A05 226 aa9.03□□□□□ -0.96
DHFR-206ENST00000513048 CXorf40BQ96DE9 158 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms