RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 TUBB8Q3ZCM7 444 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 ISLR2Q6UXK2 745 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 OR6P1Q8NGX9 317 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 INPP5DQ92835 1189 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 LZTFL1Q9NQ48 299 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 RAB6BQ9NRW1 208 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 CDC14AQ9UNH5 594 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 NOVA2Q9UNW9 492 aaKnown RBP12.04□□□□□ -0.48
VEGFA-216ENST00000512683 HS3ST3B1Q9Y662 390 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 CENPEQ02224 2701 aa12.04□□□□□ -0.48
VEGFA-216ENST00000512683 HIVEP3Q5T1R4 2406 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 OR1I1O60431 355 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 USP1O94782 785 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 HPP00738 406 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 CCDC175P0C221 793 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 MYBL2P10244 700 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 CCZ1BP86790 482 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-216ENST00000512683 RELAQ04206 551 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 OCA2Q04671 838 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 GRB7Q14451 532 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 INAQ16352 499 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 RBBP7Q16576 425 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 ARMC3Q5W041 872 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 DRICH1Q6PGQ1 229 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-216ENST00000512683 C4orf22Q6V702 233 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 PPP1R21Q6ZMI0 780 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 ZNF534Q76KX8 674 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 LRRC8AQ8IWT6 810 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 OR11G2Q8NGC1 345 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 MVB12AQ96EY5 273 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 FOPNLQ96NB1 174 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 SELENOSQ9BQE4 189 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 ZBTB20Q9HC78 741 aaPredicted RBP12.03□□□□□ -0.48
VEGFA-216ENST00000512683 ZNF304Q9HCX3 659 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 ENTPD4Q9Y227 616 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 DRG1Q9Y295 367 aaKnown RBP12.03□□□□□ -0.48
VEGFA-216ENST00000512683 FAM169AQ9Y6X4 670 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 ITPR2Q14571 2701 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 SHANK1Q9Y566 2161 aa12.03□□□□□ -0.48
VEGFA-216ENST00000512683 UTP20O75691 2785 aaKnown RBP12.03□□□□□ -0.48
VEGFA-216ENST00000512683 IGLV3-12A0A075B6K2 115 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 A0A1W2PQ72 361 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 HYKKA2RU49 373 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 E7EVH7 732 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 PFDN6O15212 129 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 PRPF4O43172 522 aaKnown RBP eCLIP12.02□□□□□ -0.491e-7■■■□□ 14.6
VEGFA-216ENST00000512683 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.49
VEGFA-216ENST00000512683 APRTP07741 180 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 CTSBP07858 339 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 STSP08842 583 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 ICAM2P13598 275 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 RPS3P23396 243 aaKnown RBP eCLIP12.02□□□□□ -0.49
VEGFA-216ENST00000512683 HSD17B2P37059 387 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 GRIA3P42263 894 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 CDC16Q13042 620 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 MFAP5Q13361 173 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 SEMA3AQ14563 771 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 MUM1Q2TAK8 710 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.02□□□□□ -0.492e-13■□□□□ 10.4
VEGFA-216ENST00000512683 PCID2Q5JVF3 399 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 WASHC2DQ5SRD0 308 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 ATG9BQ674R7 924 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 ZNF787Q6DD87 383 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 NAPRTQ6XQN6 538 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 COX15Q7KZN9 410 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 KBTBD2Q8IY47 623 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 BCORP1Q8N888 145 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 CCDC89Q8N998 374 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 GRHL3Q8TE85 626 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 HAS2Q92819 552 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 MIEF2Q96C03 454 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 TRIM56Q9BRZ2 755 aaKnown RBP12.02□□□□□ -0.49
VEGFA-216ENST00000512683 UTP6Q9NYH9 597 aaKnown RBP12.02□□□□□ -0.49
VEGFA-216ENST00000512683 SPATA7Q9P0W8 599 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 PAK5Q9P286 719 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 ZNF282Q9UDV7 671 aaPredicted RBP12.02□□□□□ -0.49
VEGFA-216ENST00000512683 PLAGL1Q9UM63 463 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 NTNG1Q9Y2I2 539 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 TCAF1Q9Y4C2 921 aa12.02□□□□□ -0.49
VEGFA-216ENST00000512683 PCM1Q15154 2024 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 H3BMM5 538 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 TXNDC9O14530 226 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 LRRTM2O43300 516 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 C1orf105O95561 183 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 FGGP02679 453 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 KCNJ1P48048 391 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 NPY2RP49146 381 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 ZRSR2Q15696 482 aaKnown RBP12.01□□□□□ -0.49
VEGFA-216ENST00000512683 HIF1AQ16665 826 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 KCTD19Q17RG1 926 aaPredicted RBP12.01□□□□□ -0.49
VEGFA-216ENST00000512683 GARNL3Q5VVW2 1013 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 PTRHD1Q6GMV3 140 aaKnown RBP12.01□□□□□ -0.49
VEGFA-216ENST00000512683 RIPOR1Q6ZS17 1223 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 NDUFAF7Q7L592 441 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 OTOAQ7RTW8 1153 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 VRK3Q8IV63 474 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 PARP9Q8IXQ6 854 aa12.01□□□□□ -0.49
VEGFA-216ENST00000512683 PPHLN1Q8NEY8 458 aaKnown RBP12.01□□□□□ -0.49
VEGFA-216ENST00000512683 CFAP61Q8NHU2 1237 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms