RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 HCFC1P51610 2035 aa18.11■□□□□ 0.49
HMGCS1-206ENST00000511774 ANXA9O76027 345 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 GSTM1P09488 218 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 RAB28P51157 221 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 CSE1LP55060 971 aaKnown RBP18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 GSTM4Q03013 218 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 RBPJQ06330 500 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 TFDP2Q14188 446 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 TCTE1Q5JU00 501 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 CNSTQ6PJW8 725 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 MEX3BQ6ZN04 569 aaKnown RBP18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 TTC29Q8NA56 475 aaPredicted RBP18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 DENND1AQ8TEH3 1009 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 P3H4Q92791 437 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 TMUB1Q9BVT8 246 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 HES7Q9BYE0 225 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 RNF32Q9H0A6 362 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 SYNPO2LQ9H987 977 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 LUC7LQ9NQ29 371 aaKnown RBP18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 DDX56Q9NY93 547 aaKnown RBP18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 IMPACTQ9P2X3 320 aa18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 ZNF282Q9UDV7 671 aaPredicted RBP18.1■□□□□ 0.49
HMGCS1-206ENST00000511774 hCG_1818297A0A087WSY0 165 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 HYKKA2RU49 373 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 KRT87PA6NCN2 255 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 OR5H15A6NDH6 313 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 OR51F1A6NGY5 319 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 IDSB3KWA1 339 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 H7C0S8 307 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 AP2A2O94973 939 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 SERPINC1P01008 464 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 CD1EP15812 388 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 CD9P21926 228 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 FDXRP22570 491 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 PSMB5P28074 263 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 ART1P52961 327 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 OCA2Q04671 838 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 CACNG1Q06432 222 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 IQCB1Q15051 598 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 PCOLCEQ15113 449 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 CHERPQ8IWX8 916 aaKnown RBP18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 C19orf43Q9BQ61 176 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 NLE1Q9NVX2 485 aaPredicted RBP18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 IL1RAPL1Q9NZN1 696 aa18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.09■□□□□ 0.49
HMGCS1-206ENST00000511774 HEATR5BQ9P2D3 2071 aa18.08■□□□□ 0.49
HMGCS1-206ENST00000511774 ADAM10O14672 748 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 WFS1O76024 890 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 COMTP21964 271 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 MARCKSL1P49006 195 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 EMP2P54851 167 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 CASP6P55212 293 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 YBX1P67809 324 aaKnown RBP18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 FAM214AQ32MH5 1076 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 ZC3H12BQ5HYM0 836 aaKnown RBP18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 C3P1Q6ZMU1 363 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 NEK10Q6ZWH5 1172 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 SPPL2CQ8IUH8 684 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 SHISA5Q8N114 240 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 LKAAEAR1Q8TD35 194 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 NRGNQ92686 78 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 CDKN2AIPNLQ96HQ2 116 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 GPR137Q96N19 417 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 GOLPH3Q9H4A6 298 aa18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 ZC3H7BQ9UGR2 993 aaKnown RBP18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 LUC7L2Q9Y383 392 aaKnown RBP18.08■□□□□ 0.48
HMGCS1-206ENST00000511774 A0A1B0GTL3 188 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 SMTNL1A8MU46 457 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 HACD1B0YJ81 288 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 OR1I1O60431 355 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 TPH1P17752 444 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 ZNF766Q5HY98 468 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 RIPOR1Q6ZS17 1223 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 CCDC50Q8IVM0 306 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 OR2L8Q8NGY9 312 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 THAP3Q8WTV1 239 aaPredicted RBP18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 MAGED4Q96JG8 741 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 IMMP1LQ96LU5 166 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 TBL1YQ9BQ87 522 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 ARNT2Q9HBZ2 717 aa18.07■□□□□ 0.48
HMGCS1-206ENST00000511774 LOC102723996A0A087X1L8 192 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 A0A0J9YVX5 310 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 FAM227AF5H4B4 570 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 S1PR4O95977 384 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 FTH1P02794 183 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 FBLP22087 321 aaKnown RBP18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 SNRPNP63162 240 aaKnown RBP18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 HSF1Q00613 529 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 ZNF33BQ06732 778 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 SF1Q15637 639 aaKnown RBP18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 SYTL3Q4VX76 610 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 ODF2Q5BJF6 829 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 ANKRD20A2Q5SQ80 823 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 ANKRD20A1Q5TYW2 823 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 ANKRD20A3Q5VUR7 823 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 FCRLBQ6BAA4 426 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 PACS1Q6VY07 963 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 SLC22A15Q8IZD6 547 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 AMER3Q8N944 861 aa18.06■□□□□ 0.48
HMGCS1-206ENST00000511774 CFAP61Q8NHU2 1237 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms