RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ISCA2Q86U28 154 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 AMIGO1Q86WK6 493 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 GPSM1Q86YR5 675 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 DCUN1D3Q8IWE4 304 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 CHCHD4Q8N4Q1 142 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 NKAPQ8N5F7 415 aaKnown RBP5.23□□□□□ -1.57
PROM1-211ENST00000511153 SNX31Q8N9S9 440 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 LINC01555Q8NAE3 123 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 OR9A1PQ8NGU1 263 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 OR5K2Q8NHB8 316 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 NETO1Q8TDF5 533 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 ASB11Q8WXH4 323 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 PKNOX2Q96KN3 472 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 FCRL4Q96PJ5 515 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 MACROD1Q9BQ69 325 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 MECRQ9BV79 373 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 LRRN3Q9H3W5 708 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 SLC32A1Q9H598 525 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 STN1Q9H668 368 aaKnown RBP5.23□□□□□ -1.57
PROM1-211ENST00000511153 KIR3DX1Q9H7L2 352 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 SYTL2Q9HCH5 934 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 BRD7Q9NPI1 651 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 POT1Q9NUX5 634 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 ACTR10Q9NZ32 417 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 WWOXQ9NZC7 414 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.23□□□□□ -1.57
PROM1-211ENST00000511153 BAHCC1Q9P281 2608 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 XPR1Q9UBH6 696 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 TAC3Q9UHF0 121 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 ZNF180Q9UJW8 692 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 EMCNQ9ULC0 261 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 CORO1CQ9ULV4 474 aaPredicted RBP5.23□□□□□ -1.57
PROM1-211ENST00000511153 PCDHGB2Q9Y5G2 931 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 COLEC10Q9Y6Z7 277 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 SPTBN4Q9H254 2564 aa5.23□□□□□ -1.57
PROM1-211ENST00000511153 SLC9B1P1A6NJY1 282 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 COPEO14579 308 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 TERTO14746 1132 aaKnown RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 SLC30A4O14863 429 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 CLGNO14967 610 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 OPA1O60313 960 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 PSIP1O75475 530 aaKnown RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 RFPL3O75679 317 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 WDR47O94967 919 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 KLHL2O95198 593 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 KCNK5O95279 499 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 MATN4O95460 622 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 S100BP04271 92 aaPredicted RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 MPOP05164 745 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 TUBBP07437 444 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 CHRM5P08912 532 aaPredicted RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 HIST1H2AGP0C0S8 130 aaPredicted RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 MYZAPP0CAP1 466 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 SLC2A4P14672 509 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 UGT2B7P16662 529 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 XRCC1P18887 633 aaPredicted RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 HIST1H2ADP20671 130 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 CDH3P22223 829 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 IMPA1P29218 277 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 PKLRP30613 574 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 RPA3P35244 121 aaPredicted RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 PIK3CGP48736 1102 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 KPNA2P52292 529 aaKnown RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 PNLIPRP1P54315 467 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 CDH13P55290 713 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 CYP4F3Q08477 520 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 SF3A3Q12874 501 aaKnown RBP eCLIP5.22□□□□□ -1.57
PROM1-211ENST00000511153 RPA4Q13156 261 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 SLC14A1Q13336 389 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 SF1Q15637 639 aaKnown RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 RNFT1Q5M7Z0 435 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 AGTRAPQ6RW13 159 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 UNC5DQ6UXZ4 953 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 WASH2PQ6VEQ5 465 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 ZNF574Q6ZN55 896 aaPredicted RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 DBX2Q6ZNG2 339 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 ZCCHC23Q6ZST2 131 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 TRABD2AQ86V40 505 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 EXOC3L1Q86VI1 746 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 OOSP2Q86WS3 158 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 FAM129CQ86XR2 697 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 MYLK4Q86YV6 388 aaPredicted RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 TBC1D21Q8IYX1 336 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 ADGRF3Q8IZF5 1079 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 CCNYL1Q8N7R7 359 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 PTGR2Q8N8N7 351 aaPredicted RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 FAM181AQ8N9Y4 354 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 MDM1Q8TC05 714 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 MCOLN3Q8TDD5 553 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 ZNF480Q8WV37 535 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 HNRNPLLQ8WVV9 542 aaKnown RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 ANKRD7Q92527 254 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 GRAMD1AQ96CP6 724 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 HIST1H2AHQ96KK5 128 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 CCDC74BQ96LY2 380 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 NSUN5Q96P11 429 aaKnown RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 GPR78Q96P69 363 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 FAM111AQ96PZ2 611 aa5.22□□□□□ -1.57
PROM1-211ENST00000511153 GFM1Q96RP9 751 aaKnown RBP5.22□□□□□ -1.57
PROM1-211ENST00000511153 SMC6Q96SB8 1091 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms