RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LHPPQ9H008 270 aa15.2■□□□□ 0.02
RAB40C-202ENST00000509637 LUC7LQ9NQ29 371 aaKnown RBP15.2■□□□□ 0.02
RAB40C-202ENST00000509637 RIMKLBQ9ULI2 386 aa15.2■□□□□ 0.02
RAB40C-202ENST00000509637 TCAF1Q9Y4C2 921 aa15.2■□□□□ 0.02
RAB40C-202ENST00000509637 FBN2P35556 2912 aa15.2■□□□□ 0.02
RAB40C-202ENST00000509637 HEATR5BQ9P2D3 2071 aa15.2■□□□□ 0.02
RAB40C-202ENST00000509637 TEP1Q99973 2627 aaKnown RBP15.19■□□□□ 0.02
RAB40C-202ENST00000509637 A0A0J9YVX5 310 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 PSMD3O43242 534 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 S1PR4O95977 384 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 STSP08842 583 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 ADRA1DP25100 572 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 NAP1L1P55209 391 aaKnown RBP15.19■□□□□ 0.02
RAB40C-202ENST00000509637 KCNK10P57789 538 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 PLOD1Q02809 727 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-202ENST00000509637 CDH17Q12864 832 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 CDC16Q13042 620 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 TUBB8Q3ZCM7 444 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 CTSL3PQ5NE16 218 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 SP5Q6BEB4 398 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-202ENST00000509637 AFTPHQ6ULP2 937 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 UNC5DQ6UXZ4 953 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 ARHGEF39Q8N4T4 335 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 OR6P1Q8NGX9 317 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 TM9SF4Q92544 642 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 DLG3Q92796 817 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 PANX2Q96RD6 677 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 SELENOSQ9BQE4 189 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 TRIM56Q9BRZ2 755 aaKnown RBP15.19■□□□□ 0.02
RAB40C-202ENST00000509637 ZNF160Q9HCG1 818 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 CHRAC1Q9NRG0 131 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.19■□□□□ 0.02
RAB40C-202ENST00000509637 ZC3H7BQ9UGR2 993 aaKnown RBP15.19■□□□□ 0.02
RAB40C-202ENST00000509637 AMFRQ9UKV5 643 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 KLK4Q9Y5K2 254 aa15.19■□□□□ 0.02
RAB40C-202ENST00000509637 CSMD1Q96PZ7 3565 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 IGKV1-8A0A0C4DH67 115 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 ARHGAP10A1A4S6 786 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 HEATR9A2RTY3 570 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 HYKKA2RU49 373 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 LIASO43766 372 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 F10P00742 488 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 ZGLP1P0C6A0 271 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 COX6A1P12074 109 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 EDN3P14138 238 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 NMBRP28336 390 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 SOX11P35716 441 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 MFAP5Q13361 173 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 ELOAQ14241 798 aaKnown RBP15.18■□□□□ 0.02
RAB40C-202ENST00000509637 GRM7Q14831 915 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 RBBP7Q16576 425 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 PRTGQ2VWP7 1150 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 P3H1Q32P28 736 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 B3GNTL1Q67FW5 361 aaPredicted RBP15.18■□□□□ 0.02
RAB40C-202ENST00000509637 ISLR2Q6UXK2 745 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 PEX26Q7Z412 305 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 DNAAF3Q8N9W5 541 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 OR2L3Q8NG85 312 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 C1orf54Q8WWF1 131 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 ASZ1Q8WWH4 475 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 HES6Q96HZ4 224 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 AGPAT4Q9NRZ5 378 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 TREX1Q9NSU2 369 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 CAPN6Q9Y6Q1 641 aa15.18■□□□□ 0.02
RAB40C-202ENST00000509637 IGLV3-12A0A075B6K2 115 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 OR2A25A4D2G3 310 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 ENO4A6NNW6 628 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 TARM1B6A8C7 271 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 F7P08709 466 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-202ENST00000509637 MST1P26927 711 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 ZNF75DP51815 510 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 GBX1Q14549 363 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 SIX1Q15475 284 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-202ENST00000509637 ZC3H12BQ5HYM0 836 aaKnown RBP15.17■□□□□ 0.02
RAB40C-202ENST00000509637 RNF44Q7L0R7 432 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 LINC00523Q86TU6 105 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 FJX1Q86VR8 437 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 OR1N1Q8NGS0 311 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 HMGCLL1Q8TB92 370 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 ZUFSPQ96AP4 578 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 BIRC8Q96P09 236 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 ALS2CR12Q96Q35 445 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 LMF1Q96S06 567 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 DESI2Q9BSY9 194 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 CRB3Q9BUF7 120 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 ZNF304Q9HCX3 659 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 SEMA3GQ9NS98 782 aa15.17■□□□□ 0.02
RAB40C-202ENST00000509637 TSR3Q9UJK0 312 aaKnown RBP15.17■□□□□ 0.02
RAB40C-202ENST00000509637 TTC7AQ9ULT0 858 aaPredicted RBP15.17■□□□□ 0.02
RAB40C-202ENST00000509637 PDZD2O15018 2839 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 PCNX1Q96RV3 2341 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 H0YGG7 62 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 PRMT5O14744 637 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 FOXS1O43638 330 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 KLHL41O60662 606 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 JRKO75564 520 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 HPP00738 406 aa15.16■□□□□ 0.02
RAB40C-202ENST00000509637 RPL22P35268 128 aaKnown RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 ARF3P61204 181 aaPredicted RBP15.16■□□□□ 0.02
RAB40C-202ENST00000509637 SNX1Q13596 522 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms