RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 SPATA3Q8NHX4 192 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 ADAMTS18Q8TE60 1221 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 CHTF18Q8WVB6 975 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 MIEF2Q96C03 454 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 C8orf44Q96CB5 159 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 TREX2Q9BQ50 279 aaPredicted RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 SELENOSQ9BQE4 189 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 MENTQ9BUN1 341 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 ARNT2Q9HBZ2 717 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 ZNF304Q9HCX3 659 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 ZNF282Q9UDV7 671 aaPredicted RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 FEZ2Q9UHY8 353 aaPredicted RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 SH3BGRL2Q9UJC5 107 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 C3orf18Q9UK00 162 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 PLAGL1Q9UM63 463 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 KLHL20Q9Y2M5 609 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 ZNF835Q9Y2P0 537 aa8.96□□□□□ -0.98
NEDD9-211ENST00000508546 AAR2Q9Y312 384 aaKnown RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 LUC7L2Q9Y383 392 aaKnown RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 FBN1P35555 2871 aaKnown RBP8.96□□□□□ -0.98
NEDD9-211ENST00000508546 IGHV1-45A0A0A0MS14 117 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 HYKKA2RU49 373 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 FAM221AA4D161 298 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 TARM1B6A8C7 271 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 CCL22O00626 93 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 SRPX2O60687 465 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-211ENST00000508546 PRAMEF2O60811 474 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 WFS1O76024 890 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 WDPCPO95876 746 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 FTH1P02794 183 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 KLK2P20151 261 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 AP2B1P63010 937 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 LTBQ06643 244 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 OLIG2Q13516 323 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 ITIH4Q14624 930 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 CDSNQ15517 529 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 DBN1Q16643 649 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 ASTE1Q2TB18 679 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-211ENST00000508546 TFDP3Q5H9I0 405 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 KAZNQ674X7 775 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 DENND5AQ6IQ26 1287 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 CNSTQ6PJW8 725 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 PACS1Q6VY07 963 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 TAS2R42Q7RTR8 314 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 RHOT2Q8IXI1 618 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 PIANPQ8IYJ0 282 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 METTL27Q8N6F8 245 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-211ENST00000508546 SUN3Q8TAQ9 357 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 THAP3Q8WTV1 239 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-211ENST00000508546 ELMO1Q92556 727 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 ZUFSPQ96AP4 578 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 DNAJC1Q96KC8 554 aaKnown RBP8.95□□□□□ -0.98
NEDD9-211ENST00000508546 APOL2Q9BQE5 337 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 GPAMQ9HCL2 828 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 DLL4Q9NR61 685 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 RIC8BQ9NVN3 520 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 NLE1Q9NVX2 485 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-211ENST00000508546 SMARCAL1Q9NZC9 954 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.95□□□□□ -0.98
NEDD9-211ENST00000508546 TINAGQ9UJW2 476 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 MEMO1Q9Y316 297 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 PCDHGB6Q9Y5F9 930 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 KLK4Q9Y5K2 254 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 MAU2Q9Y6X3 613 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 DNAJC13O75165 2243 aa8.95□□□□□ -0.98
NEDD9-211ENST00000508546 PHF3Q92576 2039 aaKnown RBP8.94□□□□□ -0.98
NEDD9-211ENST00000508546 hCG_1818297A0A087WSY0 165 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 LOC102723996A0A087X1L8 192 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 OR5H15A6NDH6 313 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 IDSB3KWA1 339 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 GOLGA6L19H0YKK7 550 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 FANCGO15287 622 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 ZRANB2O95218 330 aaKnown RBP eCLIP8.94□□□□□ -0.98
NEDD9-211ENST00000508546 MED26O95402 600 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 F10P00742 488 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 GYPCP04921 128 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 PRSS56P0CW18 603 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 ICAM2P13598 275 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 CD9P21926 228 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 CXCR2P25025 360 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 RBL1P28749 1068 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 GRIA3P42263 894 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 EMP2P54851 167 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 IQCB1Q15051 598 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 BRD3Q15059 726 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 LONRF1Q17RB8 773 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 KRTCAP3Q53RY4 240 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 DNAJC21Q5F1R6 531 aaKnown RBP8.94□□□□□ -0.98
NEDD9-211ENST00000508546 WASHC2DQ5SRD0 308 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 ABHD17BQ5VST6 288 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 FAAH2Q6GMR7 532 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 HIBCHQ6NVY1 386 aaPredicted RBP8.94□□□□□ -0.98
NEDD9-211ENST00000508546 LAPTM4BQ86VI4 370 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 SPPL2CQ8IUH8 684 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 KLHDC8BQ8IXV7 354 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 PRSS58Q8IYP2 241 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 DTWD1Q8N5C7 304 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 OR2L8Q8NGY9 312 aa8.94□□□□□ -0.98
NEDD9-211ENST00000508546 CDKN2AIPNLQ96HQ2 116 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms