RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 MAGEA11P43364 429 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 BAG6P46379 1132 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ALDH9A1P49189 494 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 AGTR2P50052 363 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 DGKQP52824 942 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLDN8P56748 225 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 COPZ1P61923 177 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PURAQ00577 322 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 BNC1Q01954 994 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TNP2Q05952 138 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CACNG1Q06432 222 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF33BQ06732 778 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 RIPPLY1Q0D2K3 151 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 LRRC74AQ0VAA2 488 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SELENBP1Q13228 472 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TUSC3Q13454 348 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 DNASE1L3Q13609 305 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 RAPSNQ13702 412 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 KIAA0040Q15053 153 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 EIF4HQ15056 248 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZRANB3Q5FWF4 1079 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SPANXN2Q5MJ10 180 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TPRG1LQ5T0D9 272 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SAMD5Q5TGI4 173 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CPZQ66K79 652 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 LETMD1Q6P1Q0 360 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SCIMPQ6UWF3 145 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 GCNT7Q6ZNI0 430 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 DET1Q7L5Y6 550 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TAS2R42Q7RTR8 314 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PLEKHH3Q7Z736 793 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SCD5Q86SK9 330 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 RBM23Q86U06 439 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SERPINA11Q86U17 422 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZBTB46Q86UZ6 589 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRIM69Q86WT6 500 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CCDC103Q8IW40 242 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SCN4BQ8IWT1 228 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TCAIMQ8N3R3 496 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 LIX1Q8N485 282 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ATG16L2Q8NAA4 619 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SIDT2Q8NBJ9 832 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 FLCNQ8NFG4 579 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ST13P5Q8NFI4 369 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR4F6Q8NGB9 312 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 OR4K2Q8NGD2 314 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 GRPEL2Q8TAA5 225 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SCAMP5Q8TAC9 235 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CNIH3Q8TBE1 160 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CD200R1Q8TD46 325 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 EEF1AKMT1Q8WVE0 214 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 NELL1Q92832 810 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TESCQ96BS2 214 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ULK4Q96C45 1275 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 RHBDF1Q96CC6 855 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMCO6Q96DC7 493 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF486Q96H40 463 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 RPRD1AQ96P16 312 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PSKH2Q96QS6 385 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SNX18Q96RF0 628 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 EPYCQ99645 322 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PITX2Q99697 317 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 MGME1Q9BQP7 344 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CPPED1Q9BRF8 314 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 NTMT1Q9BV86 223 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 HERC2P3Q9BVR0 1158 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 YIPF2Q9BWQ6 316 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TRIM8Q9BZR9 551 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SLIRPQ9GZT3 109 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 NXF2Q9GZY0 626 aaKnown RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 HOXD1Q9GZZ0 328 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CLPBQ9H078 707 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 RACGAP1Q9H0H5 632 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TPK1Q9H3S4 243 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ACTL8Q9H568 366 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 IPPKQ9H8X2 491 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SIAEQ9HAT2 523 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 IL1RAPQ9NPH3 570 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CCDC177Q9NQR7 707 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ABCB10Q9NRK6 738 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 RNF19AQ9NV58 838 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 WWOXQ9NZC7 414 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 VAPAQ9P0L0 249 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 UBA2Q9UBT2 640 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEFF2Q9UIK5 374 aaPredicted RBP4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF225Q9UK10 706 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZNF221Q9UK13 617 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 SNX6Q9UNH7 406 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 USP22Q9UPT9 525 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 RNF6Q9Y252 685 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 CFL2Q9Y281 166 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 TMEM98Q9Y2Y6 226 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 DHRS7Q9Y394 339 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PKP3Q9Y446 797 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 OARD1Q9Y530 152 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 PCDHB14Q9Y5E9 798 aa4.84□□□□□ -1.63
HMGB3P16-201ENST00000508037 ZFC3H1O60293 1989 aaKnown RBP4.84□□□□□ -1.64
HMGB3P16-201ENST00000508037 ZNF638Q14966 1978 aaKnown RBP4.84□□□□□ -1.64
HMGB3P16-201ENST00000508037 MIA3Q5JRA6 1907 aa4.84□□□□□ -1.64
HMGB3P16-201ENST00000508037 PAPPA2Q9BXP8 1791 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms