RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MEP1AQ16819 746 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 LONRF2Q1L5Z9 754 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 BTBD16Q32M84 506 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 CHRFAM7AQ494W8 412 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 HEPHL1Q6MZM0 1159 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 BHLHB9Q6PI77 547 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 HIPK1Q86Z02 1210 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 LGI4Q8N135 537 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 LRRC75A-AS1Q8N1F1 130 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 OR2L2Q8NH16 312 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 LINC01560Q8TB33 94 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 LRRN4Q8WUT4 740 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 SLCO2A1Q92959 643 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 PEBP4Q96S96 227 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 OLFM1Q99784 485 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 TTYH2Q9BSA4 534 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 CHRNA10Q9GZZ6 450 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 ZNF700Q9H0M5 742 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 MVB12BQ9H7P6 319 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 ALKBH4Q9NXW9 302 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 TRPC4Q9UBN4 977 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 ADGRE2Q9UHX3 823 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 VPS9D1Q9Y2B5 631 aa6.83□□□□□ -1.32
VCAN-207ENST00000507162 PHF3Q92576 2039 aaKnown RBP6.83□□□□□ -1.32
VCAN-207ENST00000507162 IGHV3-20A0A0C4DH32 117 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 FAM237AA0A1B0GTK4 181 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 HYKKA2RU49 373 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 MBD3L4A6NDZ8 208 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 MBD3L5A6NJ08 208 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 CLCA1A8K7I4 914 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 AURKAO14965 403 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 GPR39O43194 453 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 MAN1A2O60476 641 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 SLC25A12O75746 678 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 GFPT2O94808 682 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 SEC24DO94855 1032 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 FGFR1OPO95684 399 aaKnown RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 TP53P04637 393 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 CALB1P05937 261 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 CHRM5P08912 532 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 CHRNB2P17787 502 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 MAGP20916 626 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 FBLP22087 321 aaKnown RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 ACVR2AP27037 513 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 ADH7P40394 386 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 ARL4AP40617 200 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 VSX2P58304 361 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 SRSF2Q01130 221 aaKnown RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 FMO1Q01740 532 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 CDR2Q01850 454 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 TAZQ16635 292 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 TCTE1Q5JU00 501 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 WASHC2DQ5SRD0 308 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 YOD1Q5VVQ6 348 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 KAZNQ674X7 775 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 KIAA0930Q6ICG6 404 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 ARHGAP11AQ6P4F7 1023 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 FAM151BQ6UXP7 276 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 CRLF3Q8IUI8 442 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 MAPK1IP1LQ8NDC0 245 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 PIGTQ969N2 578 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 LRRC46Q96FV0 321 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 IMMP1LQ96LU5 166 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 PCDHB18PQ96TA0 734 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 PLCD4Q9BRC7 762 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 TUBB6Q9BUF5 446 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 AMBRA1Q9C0C7 1298 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 XPO4Q9C0E2 1151 aaKnown RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 LRTM1Q9HBL6 345 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 MAGEE1Q9HCI5 957 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 IL26Q9NPH9 171 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 PNPLA3Q9NST1 481 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 HAUS2Q9NVX0 235 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 NFKBIL1Q9UBC1 381 aaPredicted RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 ZC3H7BQ9UGR2 993 aaKnown RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 ICKQ9UPZ9 632 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 TDRKHQ9Y2W6 561 aaKnown RBP6.82□□□□□ -1.32
VCAN-207ENST00000507162 USF3Q68DE3 2245 aa6.82□□□□□ -1.32
VCAN-207ENST00000507162 SCN2AQ99250 2005 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 MATN3O15232 486 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 NEURL1O76050 574 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 RNF8O76064 485 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 MED26O95402 600 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 STATHP02808 62 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 EIF2S1P05198 315 aaKnown RBP6.81□□□□□ -1.32
VCAN-207ENST00000507162 HLA-DQB2P05538 268 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 MMP2P08253 660 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 PDHA2P29803 388 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 MIPP30301 263 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 MTIF2P46199 727 aaKnown RBP6.81□□□□□ -1.32
VCAN-207ENST00000507162 NR0B1P51843 470 aaKnown RBP6.81□□□□□ -1.32
VCAN-207ENST00000507162 NR1H2P55055 460 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 KRTAP1-1Q07627 177 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 PCSK7Q16549 785 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 CMPK2Q5EBM0 449 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 FAM182AQ5T1J6 154 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 CCDC70Q6NSX1 233 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 PAOXQ6QHF9 649 aa6.81□□□□□ -1.32
VCAN-207ENST00000507162 B3GNT6Q6ZMB0 384 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms