RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 RMDN1Q96DB5 314 aa2.54□□□□□ -2
GYPB-207ENST00000506679 PITPNM3Q9BZ71 974 aa2.54□□□□□ -2
GYPB-207ENST00000506679 GFRA4Q9GZZ7 299 aa2.54□□□□□ -2
GYPB-207ENST00000506679 THAP2Q9H0W7 228 aa2.54□□□□□ -2
GYPB-207ENST00000506679 OR10A4Q9H209 315 aa2.54□□□□□ -2
GYPB-207ENST00000506679 ERVMER34-1Q9H9K5 563 aa2.54□□□□□ -2
GYPB-207ENST00000506679 CDH20Q9HBT6 801 aa2.54□□□□□ -2
GYPB-207ENST00000506679 FAM207AQ9NSI2 230 aaPredicted RBP2.54□□□□□ -2
GYPB-207ENST00000506679 BARHL2Q9NY43 387 aa2.54□□□□□ -2
GYPB-207ENST00000506679 MYH15Q9Y2K3 1946 aa2.53□□□□□ -2
GYPB-207ENST00000506679 ATP6AP2O75787 350 aa2.53□□□□□ -2
GYPB-207ENST00000506679 CDK2AP2O75956 126 aa2.53□□□□□ -2
GYPB-207ENST00000506679 RECQL5O94762 991 aaPredicted RBP2.53□□□□□ -2
GYPB-207ENST00000506679 DDHD2O94830 711 aa2.53□□□□□ -2
GYPB-207ENST00000506679 ACSL3O95573 720 aa2.53□□□□□ -2
GYPB-207ENST00000506679 GGPS1O95749 300 aa2.53□□□□□ -2
GYPB-207ENST00000506679 CGAP01215 116 aa2.53□□□□□ -2
GYPB-207ENST00000506679 VTNP04004 478 aa2.53□□□□□ -2
GYPB-207ENST00000506679 RNF224P0DH78 156 aa2.53□□□□□ -2
GYPB-207ENST00000506679 IRF2P14316 349 aa2.53□□□□□ -2
GYPB-207ENST00000506679 EEF1B2P24534 225 aaKnown RBP2.53□□□□□ -2
GYPB-207ENST00000506679 EEF1DP29692 281 aaKnown RBP2.53□□□□□ -2
GYPB-207ENST00000506679 VEGFCP49767 419 aa2.53□□□□□ -2
GYPB-207ENST00000506679 VAMP7P51809 220 aa2.53□□□□□ -2
GYPB-207ENST00000506679 BMXP51813 675 aa2.53□□□□□ -2
GYPB-207ENST00000506679 SQLEQ14534 574 aa2.53□□□□□ -2
GYPB-207ENST00000506679 TMEM187Q14656 261 aa2.53□□□□□ -2
GYPB-207ENST00000506679 COG2Q14746 738 aa2.53□□□□□ -2
GYPB-207ENST00000506679 HYAL4Q2M3T9 481 aa2.53□□□□□ -2
GYPB-207ENST00000506679 ZFP69Q49AA0 526 aa2.53□□□□□ -2
GYPB-207ENST00000506679 SLC35D3Q5M8T2 416 aa2.53□□□□□ -2
GYPB-207ENST00000506679 LCE1FQ5T754 118 aa2.53□□□□□ -2
GYPB-207ENST00000506679 PWWP2BQ6NUJ5 590 aa2.53□□□□□ -2
GYPB-207ENST00000506679 BHLHB9Q6PI77 547 aa2.53□□□□□ -2
GYPB-207ENST00000506679 SLC25A47Q6Q0C1 308 aa2.53□□□□□ -2
GYPB-207ENST00000506679 Q6ZSR9 355 aa2.53□□□□□ -2
GYPB-207ENST00000506679 CHST3Q7LGC8 479 aa2.53□□□□□ -2
GYPB-207ENST00000506679 LSMEM2Q8N112 164 aa2.53□□□□□ -2
GYPB-207ENST00000506679 TMEM178AQ8NBL3 297 aa2.53□□□□□ -2
GYPB-207ENST00000506679 OR6J1Q8NGC5 347 aa2.53□□□□□ -2
GYPB-207ENST00000506679 OR4K1Q8NGD4 311 aa2.53□□□□□ -2
GYPB-207ENST00000506679 OR1L3Q8NH93 324 aa2.53□□□□□ -2
GYPB-207ENST00000506679 MRGPRDQ8TDS7 321 aa2.53□□□□□ -2
GYPB-207ENST00000506679 WBP2Q969T9 261 aa2.53□□□□□ -2
GYPB-207ENST00000506679 OTUB1Q96FW1 271 aaPredicted RBP2.53□□□□□ -2
GYPB-207ENST00000506679 FAM71F1Q96KD3 344 aaPredicted RBP2.53□□□□□ -2
GYPB-207ENST00000506679 C10orf90Q96M02 699 aa2.53□□□□□ -2
GYPB-207ENST00000506679 PIGQQ9BRB3 760 aa2.53□□□□□ -2
GYPB-207ENST00000506679 URM1Q9BTM9 101 aaKnown RBP2.53□□□□□ -2
GYPB-207ENST00000506679 MTMR12Q9C0I1 747 aa2.53□□□□□ -2
GYPB-207ENST00000506679 FZD8Q9H461 694 aa2.53□□□□□ -2
GYPB-207ENST00000506679 TLE6Q9H808 572 aa2.53□□□□□ -2
GYPB-207ENST00000506679 DNAJC4Q9NNZ3 241 aa2.53□□□□□ -2
GYPB-207ENST00000506679 CCDC177Q9NQR7 707 aaPredicted RBP2.53□□□□□ -2
GYPB-207ENST00000506679 NRBP1Q9UHY1 535 aa2.53□□□□□ -2
GYPB-207ENST00000506679 RASAL2Q9UJF2 1139 aa2.53□□□□□ -2
GYPB-207ENST00000506679 CPSF3Q9UKF6 684 aaKnown RBP2.53□□□□□ -2
GYPB-207ENST00000506679 MAN1B1Q9UKM7 699 aa2.53□□□□□ -2
GYPB-207ENST00000506679 LIPGQ9Y5X9 500 aa2.53□□□□□ -2
GYPB-207ENST00000506679 ARID2Q68CP9 1835 aa2.53□□□□□ -2
GYPB-207ENST00000506679 CACNA1FO60840 1977 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 AP5Z1O43299 807 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 ZNF500O60304 480 aaPredicted RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 DKC1O60832 514 aaKnown RBP eCLIP2.52□□□□□ -2.01
GYPB-207ENST00000506679 KRT33AO76009 404 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 HMBSP08397 361 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 CCDC175P0C221 793 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 CD27P26842 260 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 CSTF2P33240 577 aaKnown RBP eCLIP2.52□□□□□ -2.01
GYPB-207ENST00000506679 CCR10P46092 362 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 RPL21P46778 160 aaKnown RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 ZNF41P51814 821 aaPredicted RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 UBASH3AP57075 661 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 ERVK11-1P61568 191 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 SP3Q02447 781 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 VEZF1Q14119 521 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 RRS1Q15050 365 aaKnown RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 PHKG1Q16816 387 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 TCTE1Q5JU00 501 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 KRT39Q6A163 491 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 CCDC186Q7Z3E2 898 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 TLK2Q86UE8 772 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 LACC1Q8IV20 430 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 CDK20Q8IZL9 346 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 NDUFAF2Q8N183 169 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 RASGEF1AQ8N9B8 481 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 CAMKVQ8NCB2 501 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 ZNF248Q8NDW4 579 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 OR10G8Q8NGN5 311 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 VANGL1Q8TAA9 524 aaPredicted RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 GATAD1Q8WUU5 269 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 SUSD6Q92537 303 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 EXT2Q93063 718 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 SECISBP2LQ93073 1101 aaKnown RBP2.52□□□□□ -2.01
GYPB-207ENST00000506679 AZIN2Q96A70 460 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 VPS33AQ96AX1 596 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 ART5Q96L15 291 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 C4orf45Q96LM5 186 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 MAP3K3Q99759 626 aa2.52□□□□□ -2.01
GYPB-207ENST00000506679 OPRPNQ99935 248 aaPredicted RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms