RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 ROR1Q01973 937 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 KRTAP1-1Q07627 177 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 DMPKQ09013 629 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 MFSD12Q6NUT3 480 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 FOXL2NBQ6ZUU3 175 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 DNAJB7Q7Z6W7 309 aaPredicted RBP5.55□□□□□ -1.52
HERC4-213ENST00000506515 TMPRSS11BQ86T26 416 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 CCAR2Q8N163 923 aaKnown RBP5.55□□□□□ -1.52
HERC4-213ENST00000506515 METTL27Q8N6F8 245 aaPredicted RBP5.55□□□□□ -1.52
HERC4-213ENST00000506515 IQUBQ8NA54 791 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 PPFIBP2Q8ND30 876 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 ROBO4Q8WZ75 1007 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 STAMBPL1Q96FJ0 436 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 C17orf77Q96MU5 243 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 VN1R1Q9GZP7 353 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 PELI2Q9HAT8 420 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 B3GAT1Q9P2W7 334 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 ABT1Q9ULW3 272 aaKnown RBP5.55□□□□□ -1.52
HERC4-213ENST00000506515 LRRC37A3O60309 1634 aa5.55□□□□□ -1.52
HERC4-213ENST00000506515 COL24A1Q17RW2 1714 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 NHSQ6T4R5 1651 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 A0A1W2PPI3 338 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 SMIM18P0DKX4 95 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 AMD1P17707 334 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 EEF1B2P24534 225 aaKnown RBP5.54□□□□□ -1.52
HERC4-213ENST00000506515 EPHA2P29317 976 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 NPY4RP50391 375 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 MZT1Q08AG7 82 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 GAGE5Q13069 117 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 GAGE6Q13070 117 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 PPIGQ13427 754 aaKnown RBP eCLIP5.54□□□□□ -1.52
HERC4-213ENST00000506515 KIR2DS3Q14952 304 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 KIAA1161Q6NSJ0 714 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 TRAT1Q6PIZ9 186 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 CORO6Q6QEF8 472 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 C9orf139Q6ZV77 190 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 C9orf106Q8NAJ2 232 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 DMBX1Q8NFW5 382 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 ZNF473Q8WTR7 871 aaKnown RBP5.54□□□□□ -1.52
HERC4-213ENST00000506515 SSMEM1Q8WWF3 244 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 SPSB1Q96BD6 273 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 OTUB1Q96FW1 271 aaPredicted RBP5.54□□□□□ -1.52
HERC4-213ENST00000506515 PKP4Q99569 1192 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 Q9N2K0 584 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 TCF7L2Q9NQB0 619 aa5.54□□□□□ -1.52
HERC4-213ENST00000506515 KTN1Q86UP2 1357 aaKnown RBP5.54□□□□□ -1.52
HERC4-213ENST00000506515 SLIT3O75094 1523 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 TRPM1Q7Z4N2 1603 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 A0A1W2PPQ1 181 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 A0A1W2PRB8 838 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 ARHGEF37A1IGU5 675 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 PRR32B1ATL7 298 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 E9PI62 339 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 PTGESO14684 152 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 KCNAB3O43448 404 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 ACSL3O95573 720 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 WDPCPO95876 746 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 ATP1A1P05023 1023 aaKnown RBP5.53□□□□□ -1.52
HERC4-213ENST00000506515 IFNAR1P17181 557 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 GP5P40197 560 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 ERVFC1-1P60608 527 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 POLR2LP62875 67 aaKnown RBP5.53□□□□□ -1.52
HERC4-213ENST00000506515 CX3CL1P78423 397 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 ZNF273Q14593 569 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 ARHGAP22Q7Z5H3 698 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 ANKRD23Q86SG2 305 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 METTL23Q86XA0 190 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 TRIML1Q8N9V2 468 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 SLC24A4Q8NFF2 622 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 OR13J1Q8NGT2 312 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 SETD6Q8TBK2 473 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 SGK494Q96LW2 274 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 CPNE1Q99829 537 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 SERINC1Q9NRX5 453 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 DONSONQ9NYP3 566 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 TAAR2Q9P1P5 351 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 ARHGEF28Q8N1W1 1705 aaKnown RBP5.53□□□□□ -1.52
HERC4-213ENST00000506515 BTAF1O14981 1849 aa5.53□□□□□ -1.52
HERC4-213ENST00000506515 C10orf71Q711Q0 1435 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 NEMP2A6NFY4 417 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 OR6C76A6NM76 312 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 CLDN4O14493 209 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 GAPDHSO14556 408 aaPredicted RBP5.52□□□□□ -1.53
HERC4-213ENST00000506515 XPNPEP2O43895 674 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 NR1D1P20393 614 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 MSH3P20585 1137 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 RFC4P35249 363 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 CDH11P55287 796 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 MAP2K1Q02750 393 aaPredicted RBP5.52□□□□□ -1.53
HERC4-213ENST00000506515 ILF3Q12906 894 aaKnown RBP eCLIP5.52□□□□□ -1.53
HERC4-213ENST00000506515 ALDH1L2Q3SY69 923 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 HECTD3Q5T447 861 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 PRR27Q6MZM9 219 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 CAVIN1Q6NZI2 390 aaKnown RBP5.52□□□□□ -1.53
HERC4-213ENST00000506515 DCLRE1AQ6PJP8 1040 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 LINGO4Q6UY18 593 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 ANO5Q75V66 913 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 NUP54Q7Z3B4 507 aa5.52□□□□□ -1.53
HERC4-213ENST00000506515 TLK2Q86UE8 772 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms