RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 SMARCAL1Q9NZC9 954 aa3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 CACNG4Q9UBN1 327 aa3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 ACAD8Q9UKU7 415 aa3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 MTUS1Q9ULD2 1270 aa3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 MYO6Q9UM54 1294 aa3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 PDS5AQ29RF7 1337 aaKnown RBP3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 TONSLQ96HA7 1378 aa3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 EDC4Q6P2E9 1401 aaKnown RBP3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 FAM208AQ9UK61 1670 aaKnown RBP3.08□□□□□ -1.92
TRAPPC11-205ENST00000506426 DOT1LQ8TEK3 1739 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 AKAP12Q02952 1782 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 A0A1W2PRV1 198 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 HYKKA2RU49 373 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 YDJCA8MPS7 323 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PRR32B1ATL7 298 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 EIF3DO15371 548 aaKnown RBP eCLIP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 HTATSF1O43719 755 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 KINO60870 393 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 KERAO60938 352 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 CAMTA2O94983 1202 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ACSL3O95573 720 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PNPP00491 289 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 MT-ND3P03897 115 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 H1F0P07305 194 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PRSS2P07478 247 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 CSN3P07498 182 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 SNRNP70P08621 437 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 EEF2P13639 858 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 MYOD1P15172 320 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 MPZP25189 248 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 HSD17B3P37058 310 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ABCG1P45844 678 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PCYT1AP49585 367 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 MLLT10P55197 1068 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 UBASH3AP57075 661 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PTENP60484 403 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 C1QTNF8P60827 252 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ST8SIA6P61647 398 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 DLK1P80370 383 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 BNC1Q01954 994 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 EEF1A2Q05639 463 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ACTN3Q08043 901 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PNRC1Q12796 327 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 TNK1Q13470 666 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 CUL3Q13618 768 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 KLF9Q13886 244 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF234Q14588 700 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ETFDHQ16134 617 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 HLFQ16534 295 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 KBTBD12Q3ZCT8 623 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 GRTP1Q5TC63 336 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 CASC4Q6P4E1 433 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ALKBH5Q6P6C2 394 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 TMEM182Q6ZP80 229 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 DGLUCYQ7Z3D6 616 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 TMPRSS11BQ86T26 416 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PTOV1Q86YD1 416 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 FAM114A1Q8IWE2 563 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 C1orf87Q8N0U7 546 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 CLYBLQ8N0X4 340 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 OR7G3Q8NG95 312 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PSMA8Q8TAA3 256 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ATP6V0A1Q93050 837 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 SNX21Q969T3 373 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ST6GALNAC6Q969X2 333 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 SCMH1Q96GD3 660 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 CDHR1Q96JP9 859 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 HNRNPABQ99729 332 aaKnown RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 NEURL2Q9BR09 285 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ACAT2Q9BWD1 397 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 SLC5A7Q9GZV3 580 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 TUFT1Q9NNX1 390 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 TMEM30AQ9NV96 361 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 SIX4Q9UIU6 781 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 MOSPD1Q9UJG1 213 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 SPIN1Q9Y657 262 aaPredicted RBP3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ANKRD36BQ8N2N9 1353 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 PALLDQ8WX93 1383 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ATP10DQ9P241 1426 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 SHANK3Q9BYB0 1731 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 RGPD5Q99666 1765 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 BTAF1O14981 1849 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 SBF2Q86WG5 1849 aa3.07□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZCWPW2A0A1B0GU75 182 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 A0A1W2PPW3 197 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 WDR91A4D1P6 747 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 SDR42E2A6NKP2 422 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNHIT1O43257 154 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 RTN2O75298 545 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 WISP2O76076 250 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 LTN1O94822 1766 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 KDM4BO94953 1096 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 GCNT3O95395 438 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 KRT19P08727 400 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 LINC00271P0C7V0 271 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 FAM106CPP0CH98 169 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 SPP1P10451 314 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 CSF2RAP15509 400 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 ZNF23P17027 643 aa3.06□□□□□ -1.92
TRAPPC11-205ENST00000506426 GM2AP17900 193 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms