RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SLC41A2Q96JW4 573 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 GPR78Q96P69 363 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 UNKQ9C0B0 810 aaKnown RBP11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 NRSN2Q9GZP1 204 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 CHRNA10Q9GZZ6 450 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 VPS11Q9H270 941 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 TBK1Q9UHD2 729 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 PLAAQ9Y263 795 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 PCDHB11Q9Y5F2 797 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 PCDHGA8Q9Y5G5 932 aa11.49□□□□□ -0.57
PDLIM5-208ENST00000504489 SCN3AQ9NY46 2000 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 ACACAQ13085 2346 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 A0A0J9YY10 115 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 A0A1W2PNU3 283 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 TRABD2BA6NFA1 517 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 PLD2O14939 933 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 KERAO60938 352 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 ZBTB11O95625 1053 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 GUCA1CO95843 209 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 ANXA5P08758 320 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 NELFEP18615 380 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 CCND1P24385 295 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 LSSP48449 732 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 KCNC1P48547 511 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 HNMTP50135 292 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 RTP5Q14D33 572 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 SF1Q15637 639 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 TSNAXIP1Q2TAA8 658 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 BEND6Q5SZJ8 279 aaPredicted RBP11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 KLC3Q6P597 504 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 MBOAT1Q6ZNC8 495 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 FRA10AC1Q70Z53 315 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 CLEC14AQ86T13 490 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 TAX1BP1Q86VP1 789 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 LCA5Q86VQ0 697 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 CYP4X1Q8N118 509 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 PLD6Q8N2A8 252 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 FBXO39Q8N4B4 442 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 PPFIBP2Q8ND30 876 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 OR2A1Q8NGT9 310 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 OR56A3Q8NH54 315 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 PPM1MQ96MI6 270 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 TRAPPC9Q96Q05 1148 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 ATOH8Q96SQ7 321 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 SGPP1Q9BX95 441 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 PCBD2Q9H0N5 130 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 ALG9Q9H6U8 611 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 POLR1BQ9H9Y6 1135 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 UTP6Q9NYH9 597 aaKnown RBP11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 LGALS13Q9UHV8 139 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 ANGPTL2Q9UKU9 493 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 RNF112Q9ULX5 631 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 SATB2Q9UPW6 733 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 BTRCQ9Y297 605 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 LOXL2Q9Y4K0 774 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 KLK4Q9Y5K2 254 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 AHCTF1Q8WYP5 2266 aa11.48□□□□□ -0.57
PDLIM5-208ENST00000504489 TLDC2A0PJX2 215 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 SLC9B1P1A6NJY1 282 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 SMIM23A6NLE4 172 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 B4E171 279 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 MT-ND3P03897 115 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 FGF3P11487 239 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 ST6GAL1P15907 406 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 RPA3P35244 121 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 TSPAN7P41732 249 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 SEPHS1P49903 392 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 HSD11B2P80365 405 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 MC2RQ01718 297 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 NAE1Q13564 534 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 ZXDCQ2QGD7 858 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 C3orf38Q5JPI3 329 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 SULT1C3Q6IMI6 304 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 IGF2-ASQ6U949 168 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 SUSD1Q6UWL2 747 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 SH2D5Q6ZV89 423 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 TCAIMQ8N3R3 496 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 D2HGDHQ8N465 521 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 BMPERQ8N8U9 685 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 PDPRQ8NCN5 879 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 OR2L3Q8NG85 312 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 ZUFSPQ96AP4 578 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 RHBDF1Q96CC6 855 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 PRR11Q96HE9 360 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 ATG10Q9H0Y0 220 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 CCDC177Q9NQR7 707 aaPredicted RBP11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 INTS7Q9NVH2 962 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 SIDT1Q9NXL6 827 aaKnown RBP11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 SCN2AQ99250 2005 aa11.47□□□□□ -0.57
PDLIM5-208ENST00000504489 A0A1W2PPM1 405 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 EFCAB7A8K855 629 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 SYCE1LA8MT33 242 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 TARM1B6A8C7 271 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 DXOO77932 396 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 CCNDBP1O95273 360 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 GSTA1P08263 222 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 RBP1P09455 135 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 MSL3P1P0C860 447 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 JMJD7P0C870 316 aa11.46□□□□□ -0.57
PDLIM5-208ENST00000504489 CCL4P13236 92 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms