RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 GRIA3P42263 894 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 KLK7P49862 253 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 OC90Q02509 493 aaPredicted RBP11.87□□□□□ -0.51
LSM6-204ENST00000504181 NOMO1Q15155 1222 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 MAPKAPK3Q16644 382 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 FLYWCH1Q4VC44 716 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 CCDC122Q5T0U0 273 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 ACAD11Q709F0 780 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 P3H2Q8IVL5 708 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 OR5M3Q8NGP4 307 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 OR5AR1Q8NGP9 310 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 LINC00615Q96LM1 132 aaPredicted RBP11.87□□□□□ -0.51
LSM6-204ENST00000504181 BDH2Q9BUT1 245 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 YIPF2Q9BWQ6 316 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 CEP41Q9BYV8 373 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 SLC6A16Q9GZN6 736 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 COG4Q9H9E3 785 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 PLAGL1Q9UM63 463 aa11.87□□□□□ -0.51
LSM6-204ENST00000504181 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TMEM191CA6NGB0 347 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TRIM64A6NGJ6 449 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TRIM64BA6NI03 449 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 KCNK1O00180 336 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TFECO14948 347 aaPredicted RBP11.86□□□□□ -0.51
LSM6-204ENST00000504181 RARAP10276 462 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 ZFP36L2P47974 494 aaKnown RBP11.86□□□□□ -0.51
LSM6-204ENST00000504181 ZBTB17Q13105 803 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TPD52L1Q16890 204 aaPredicted RBP11.86□□□□□ -0.51
LSM6-204ENST00000504181 FAM214AQ32MH5 1076 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 EMC4Q5J8M3 183 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TCTE1Q5JU00 501 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 NCBP2-AS2Q69YL0 99 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 SLC25A25Q6KCM7 469 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 PODNL1Q6PEZ8 512 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 CRLF3Q8IUI8 442 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 LIX1LQ8IVB5 337 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 CNTD1Q8N815 330 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TFGQ92734 400 aaPredicted RBP11.86□□□□□ -0.51
LSM6-204ENST00000504181 FATE1Q969F0 183 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 IMMP1LQ96LU5 166 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TSGA13Q96PP4 275 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 SELENOSQ9BQE4 189 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TUBB6Q9BUF5 446 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 PLEKHF2Q9H8W4 249 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 SMOXQ9NWM0 555 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 STOX2Q9P2F5 926 aaPredicted RBP11.86□□□□□ -0.51
LSM6-204ENST00000504181 TDRKHQ9Y2W6 561 aaKnown RBP11.86□□□□□ -0.51
LSM6-204ENST00000504181 ALG6Q9Y672 507 aa11.86□□□□□ -0.51
LSM6-204ENST00000504181 TGP01266 2768 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 IGLV3-12A0A075B6K2 115 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 LOC102723996A0A087X1L8 192 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 TMCO5BA8MYB1 307 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 MAN1A2O60476 641 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 NEURL1O76050 574 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 SEC24DO94855 1032 aaPredicted RBP11.85□□□□□ -0.51
LSM6-204ENST00000504181 NDST3O95803 873 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 TFEBP19484 476 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 UQCRC1P31930 480 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 RFC3P40938 356 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 PRLHRP49683 370 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 VSX2P58304 361 aaPredicted RBP11.85□□□□□ -0.51
LSM6-204ENST00000504181 MEP1AQ16819 746 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 BTBD16Q32M84 506 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 ZDHHC20Q5W0Z9 365 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 CCDC70Q6NSX1 233 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 UNC5DQ6UXZ4 953 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 WDR53Q7Z5U6 358 aaPredicted RBP11.85□□□□□ -0.51
LSM6-204ENST00000504181 PAQR7Q86WK9 346 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 CXorf67Q86X51 503 aaPredicted RBP11.85□□□□□ -0.51
LSM6-204ENST00000504181 CCNYQ8ND76 341 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 DTX3LQ8TDB6 740 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 NPAS2Q99743 824 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 KCNK13Q9HB14 408 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.85□□□□□ -0.51
LSM6-204ENST00000504181 TRPC4Q9UBN4 977 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 DSCAMO60469 2012 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 CR1P17927 2039 aa11.85□□□□□ -0.51
LSM6-204ENST00000504181 MEGF8Q7Z7M0 2845 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 IGHV3-20A0A0C4DH32 117 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 HYKKA2RU49 373 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 FITM1A5D6W6 292 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 GABRR3A8MPY1 467 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 EPHB6O15197 1021 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 HS6ST1O60243 411 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 PRMT3O60678 531 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 PDE9AO76083 593 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 CD48P09326 243 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 TPBGLP0DKB5 382 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 PCK1P35558 622 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 CD151P48509 253 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 EFNA3P52797 238 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 KRT81Q14533 505 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 PAFAH1B3Q15102 231 aaKnown RBP11.84□□□□□ -0.51
LSM6-204ENST00000504181 BOLA3Q53S33 107 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 WASHC2DQ5SRD0 308 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 H3F3CQ6NXT2 135 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 PRMT9Q6P2P2 845 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 HORMAD2Q8N7B1 307 aa11.84□□□□□ -0.51
LSM6-204ENST00000504181 SPATA22Q8NHS9 363 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms