RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 PTERQ96BW5 349 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 FBXL8Q96CD0 374 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 TCTN2Q96GX1 697 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 TEFMQ96QE5 360 aaKnown RBP24.19■■□□□ 1.46
LSM6-202ENST00000502781 OR6C1Q96RD1 312 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 ZPBPQ9BS86 351 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 UNKQ9C0B0 810 aaKnown RBP24.19■■□□□ 1.46
LSM6-202ENST00000502781 KLHL25Q9H0H3 589 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 PDE7BQ9NP56 450 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 SOHLH2Q9NX45 425 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 FOXJ2Q9P0K8 574 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 PCDHB11Q9Y5F2 797 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 ADAMTS20P59510 1910 aa24.19■■□□□ 1.46
LSM6-202ENST00000502781 SNRNP200O75643 2136 aaKnown RBP24.19■■□□□ 1.46
LSM6-202ENST00000502781 A0A087X1B8 175 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 POLR1CO15160 346 aaPredicted RBP24.18■■□□□ 1.46
LSM6-202ENST00000502781 TLX3O43711 291 aaPredicted RBP24.18■■□□□ 1.46
LSM6-202ENST00000502781 TUBBP07437 444 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 SNRPAP09012 282 aaKnown RBP24.18■■□□□ 1.46
LSM6-202ENST00000502781 FGF5P12034 268 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 MAGP20916 626 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 GABRA4P48169 554 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 NAA30Q147X3 362 aaPredicted RBP24.18■■□□□ 1.46
LSM6-202ENST00000502781 TMTC4Q5T4D3 741 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 DCAF12Q5T6F0 453 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 CEACAM20Q6UY09 585 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 CDHR3Q6ZTQ4 885 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 TBC1D1Q86TI0 1168 aaPredicted RBP24.18■■□□□ 1.46
LSM6-202ENST00000502781 PROSER1Q86XN7 944 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 FAM60AQ9NP50 221 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 FGF21Q9NSA1 209 aa24.18■■□□□ 1.46
LSM6-202ENST00000502781 UTP6Q9NYH9 597 aaKnown RBP24.18■■□□□ 1.46
LSM6-202ENST00000502781 A0A096LPK6 155 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 TRIM49D1C9J1S8 452 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 KRT37O76014 449 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 SHBGP04278 402 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 LTA4HP09960 611 aaKnown RBP24.17■■□□□ 1.46
LSM6-202ENST00000502781 HSD17B3P37058 310 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 GRIA3P42263 894 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 YBX1P67809 324 aaKnown RBP24.17■■□□□ 1.46
LSM6-202ENST00000502781 FOXM1Q08050 763 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 TUBB3Q13509 450 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 LGSNQ5TDP6 509 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 CYB5D1Q6P9G0 228 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 ISCA2Q86U28 154 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 BPHLQ86WA6 291 aaPredicted RBP24.17■■□□□ 1.46
LSM6-202ENST00000502781 CNPY4Q8N129 248 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 ATL1Q8WXF7 558 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 ZCCHC14Q8WYQ9 949 aaKnown RBP24.17■■□□□ 1.46
LSM6-202ENST00000502781 ZUFSPQ96AP4 578 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 ZNF501Q96CX3 271 aaPredicted RBP24.17■■□□□ 1.46
LSM6-202ENST00000502781 CNTNAP3BQ96NU0 1288 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 MIPEPQ99797 713 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 CCDC77Q9BR77 488 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 ACAT2Q9BWD1 397 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 SGPP1Q9BX95 441 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 CNTNAP3Q9BZ76 1288 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 SPRY4Q9C004 299 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 NMRAL1Q9HBL8 299 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 TLK1Q9UKI8 766 aa24.17■■□□□ 1.46
LSM6-202ENST00000502781 PABPN1LA6NDY0 278 aaKnown RBP24.16■■□□□ 1.46
LSM6-202ENST00000502781 TARM1B6A8C7 271 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 TAF4O00268 1085 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 RPA3P35244 121 aaPredicted RBP24.16■■□□□ 1.46
LSM6-202ENST00000502781 TBPL1P62380 186 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 IRF9Q00978 393 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 PRDX1Q06830 199 aaKnown RBP24.16■■□□□ 1.46
LSM6-202ENST00000502781 TGFBIQ15582 683 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 OR4D1Q15615 310 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 TAF1BQ53T94 588 aaPredicted RBP24.16■■□□□ 1.46
LSM6-202ENST00000502781 FCRL6Q6DN72 434 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 TIFABQ6ZNK6 161 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 OR56A3Q8NH54 315 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 NXNL1Q96CM4 212 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 CTRCQ99895 268 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 ATG10Q9H0Y0 220 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 PPCSQ9HAB8 311 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 CCDC177Q9NQR7 707 aaPredicted RBP24.16■■□□□ 1.46
LSM6-202ENST00000502781 INTS7Q9NVH2 962 aaKnown RBP24.16■■□□□ 1.46
LSM6-202ENST00000502781 TAC3Q9UHF0 121 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 KLHL20Q9Y2M5 609 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 CCDC189A1A4V9 331 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.16■■□□□ 1.46
LSM6-202ENST00000502781 MAP3K7O43318 606 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 GUCA1CO95843 209 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 CD82P27701 267 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 CMPK1P30085 196 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 ABATP80404 500 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 NAE1Q13564 534 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 RASA2Q15283 850 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 GPR19Q15760 415 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.16■■□□□ 1.46
LSM6-202ENST00000502781 CDKL4Q5MAI5 379 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 ICE2Q659A1 982 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 FIGLAQ6QHK4 219 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 TDRPQ86YL5 185 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 DNAJC22Q8N4W6 341 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 OR8K5Q8NH50 307 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 KCTD4Q8WVF5 259 aa24.16■■□□□ 1.46
LSM6-202ENST00000502781 MTBPQ96DY7 904 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms