RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 NKX2-5P52952 324 aaPredicted RBP16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 SPANXN4Q5MJ08 99 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 HFE2Q6ZVN8 426 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 MMAAQ8IVH4 418 aaKnown RBP16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 DUSP26Q9BV47 211 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 MALT1Q9UDY8 824 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 DHRS7Q9Y394 339 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 CMAHPQ9Y471 501 aa16.83■□□□□ 0.28
HMGXB3-201ENST00000502717 AP3D1O14617 1153 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF26P17031 533 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 C1QTNF8P60827 252 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 OR4F6Q8NGB9 312 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 LRCH3Q96II8 777 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 OLAHQ9NV23 265 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 MAP4K5Q9Y4K4 846 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 SPIN1Q9Y657 262 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 A8MV72 311 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 NIPSNAP2O75323 286 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 BUD31P41223 144 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 CD47Q08722 323 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 CHIT1Q13231 466 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 APOFQ13790 326 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 NOMO2Q5JPE7 1267 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 ADGRG5Q8IZF4 528 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 CFAP52Q8N1V2 620 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 CCDC32Q9BV29 185 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 ACAT2Q9BWD1 397 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 FAIM2Q9BWQ8 316 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 OCEL1Q9H607 264 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 IFT52Q9Y366 437 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 DNAJC15Q9Y5T4 150 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 RPN2P04844 631 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 MANFP55145 182 aaKnown RBP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 DCDC1P59894 354 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 NCS1P62166 190 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 RIPPLY1Q0D2K3 151 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 ALFQ53S48 1182 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 SPARTQ8N0X7 666 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 EBPLQ9BY08 206 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 GTF2A1LQ9UNN4 478 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 HEMK1Q9Y5R4 338 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 UPK1BO75841 260 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 GPAT3Q53EU6 434 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 SUSD6Q92537 303 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 MND1Q9BWT6 205 aa16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF717Q9BY31 904 aaPredicted RBP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 INTS7Q9NVH2 962 aaKnown RBP16.82■□□□□ 0.28
HMGXB3-201ENST00000502717 ENPP3O14638 875 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 FYNP06241 537 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 CCNYL3P0C7X3 344 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 PEPDP12955 493 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 CSTF2P33240 577 aaKnown RBP eCLIP16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 STC1P52823 247 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 WNT7BP56706 349 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 SLC10A7Q0GE19 358 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 SERPINA9Q86WD7 417 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 HSH2DQ96JZ2 352 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF599Q96NL3 588 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 PDGFDQ9GZP0 370 aaPredicted RBP16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 ASAH2Q9NR71 780 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 FBXO10Q9UK96 956 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 DCLK1O15075 740 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 CD1DP15813 335 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 TACR2P21452 398 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 PSMA3P25788 255 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 RUNDC3AQ59EK9 446 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 PIWIL3Q7Z3Z3 882 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 CTU1Q7Z7A3 348 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 SLC29A3Q9BZD2 475 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 MIR1-1HGQ9H1L0 117 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 MAGIXQ9H6Y5 334 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 SEC14L4Q9UDX3 406 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 PEX10O60683 326 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 FAUP35544 74 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 NFKB2Q00653 900 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 KCNJ8Q15842 424 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF367Q7RTV3 350 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 ARNTL2Q8WYA1 636 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 ZNF382Q96SR6 550 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 POLR2J3Q9H1A7 115 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 EIF3KQ9UBQ5 218 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 TCEA1P23193 301 aaKnown RBP16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 TAS2R41P59536 307 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 TAZQ16635 292 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 DUOXA1Q1HG43 343 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 RAB6CQ53S08 254 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 SLC37A3Q8NCC5 494 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 GSDMCQ9BYG8 508 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 RAB6CQ9H0N0 254 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 TIGARQ9NQ88 270 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 TVP23BQ9NYZ1 205 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 PCDHGC4Q9Y5F7 938 aa16.81■□□□□ 0.28
HMGXB3-201ENST00000502717 C2orf80Q0P641 193 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 KCNA10Q16322 511 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 L3HYPDHQ96EM0 354 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 CAPN10Q9HC96 672 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 PPEF2O14830 753 aa16.8■□□□□ 0.28
HMGXB3-201ENST00000502717 NME6O75414 186 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms