RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SPATA4Q8NEY3 305 aa5□□□□□ -1.61
FXN-205ENST00000498653 OR52K2Q8NGK3 314 aa5□□□□□ -1.61
FXN-205ENST00000498653 FBLIM1Q8WUP2 373 aa5□□□□□ -1.61
FXN-205ENST00000498653 CASKIN2Q8WXE0 1202 aa5□□□□□ -1.61
FXN-205ENST00000498653 OR1E3Q8WZA6 343 aa5□□□□□ -1.61
FXN-205ENST00000498653 GAL3ST3Q96A11 431 aa5□□□□□ -1.61
FXN-205ENST00000498653 FUBP1Q96AE4 644 aaKnown RBP5□□□□□ -1.61
FXN-205ENST00000498653 ALG14Q96F25 216 aa5□□□□□ -1.61
FXN-205ENST00000498653 CCDC114Q96M63 670 aa5□□□□□ -1.61
FXN-205ENST00000498653 ZNF599Q96NL3 588 aa5□□□□□ -1.61
FXN-205ENST00000498653 OLFM3Q96PB7 478 aa5□□□□□ -1.61
FXN-205ENST00000498653 GBP5Q96PP8 586 aa5□□□□□ -1.61
FXN-205ENST00000498653 KRT12Q99456 494 aa5□□□□□ -1.61
FXN-205ENST00000498653 CARD6Q9BX69 1037 aa5□□□□□ -1.61
FXN-205ENST00000498653 HDAC8Q9BY41 377 aa5□□□□□ -1.61
FXN-205ENST00000498653 C10orf88Q9H8K7 445 aa5□□□□□ -1.61
FXN-205ENST00000498653 HAUS2Q9NVX0 235 aa5□□□□□ -1.61
FXN-205ENST00000498653 TMEM160Q9NX00 188 aa5□□□□□ -1.61
FXN-205ENST00000498653 GAR1Q9NY12 217 aaKnown RBP5□□□□□ -1.61
FXN-205ENST00000498653 UBA2Q9UBT2 640 aaPredicted RBP5□□□□□ -1.61
FXN-205ENST00000498653 KLQ9UEF7 1012 aa5□□□□□ -1.61
FXN-205ENST00000498653 KLHL3Q9UH77 587 aa5□□□□□ -1.61
FXN-205ENST00000498653 SLC25A13Q9UJS0 675 aa5□□□□□ -1.61
FXN-205ENST00000498653 DNPEPQ9ULA0 475 aa5□□□□□ -1.61
FXN-205ENST00000498653 OR51B4Q9Y5P0 310 aa5□□□□□ -1.61
FXN-205ENST00000498653 PHF3Q92576 2039 aaKnown RBP5□□□□□ -1.61
FXN-205ENST00000498653 CCDC88CQ9P219 2028 aa5□□□□□ -1.61
FXN-205ENST00000498653 RAI1Q7Z5J4 1906 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 STAB2Q8WWQ8 2551 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 CXorf51AA0A1B0GTR3 108 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 RBMY1BA6NDE4 496 aaKnown RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 RBMY1EA6NEQ0 496 aaKnown RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 TOR1BO14657 336 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 DNAJB6O75190 326 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 ZMPSTE24O75844 475 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 GAS8O95995 478 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 IFNB1P01574 187 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 JCHAINP01591 159 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 KRT14P02533 472 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 PF4P02776 101 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 CAPN1P07384 714 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 RAB40ALP0C0E4 278 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 RBMY1DP0C7P1 496 aaKnown RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 CCNB1P14635 433 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 HSPA9P38646 679 aaKnown RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 MMP13P45452 471 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 KCNJ1P48048 391 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 RENBPP51606 427 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 NR1H2P55055 460 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 IFI35P80217 286 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 DR1Q01658 176 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 GPS2Q13227 327 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 DHX34Q14147 1143 aaKnown RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 RFTN1Q14699 578 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 NFATC4Q14934 902 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 DAZAP2Q15038 168 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 PPP1R7Q15435 360 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 OASLQ15646 514 aaKnown RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 ACCSLQ4AC99 568 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 INO80DQ53TQ3 878 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 WIPI1Q5MNZ9 446 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 MARC1Q5VT66 337 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 CCDC70Q6NSX1 233 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 PWWP2BQ6NUJ5 590 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 CDPF1Q6NVV7 123 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 TTC27Q6P3X3 843 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 FAM198BQ6UWH4 519 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 ENPP7Q6UWV6 458 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 C4orf22Q6V702 233 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 LEKR1Q6ZMV7 388 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 Q6ZPA2 131 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 CEP128Q6ZU80 1094 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 SYDE1Q6ZW31 735 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 PID1Q7Z2X4 250 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 MAATS1Q7Z4T9 603 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 PPP1R3BQ86XI6 285 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 NRROSQ86YC3 692 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 CCDC71Q8IV32 467 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 SHISA5Q8N114 240 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 MMGT1Q8N4V1 131 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 CCDC89Q8N998 374 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 FAM71DQ8N9W8 422 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 MYRIPQ8NFW9 859 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 OR1N1Q8NGS0 311 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 THAP3Q8WTV1 239 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 MAML1Q92585 1016 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 FATE1Q969F0 183 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 RHOVQ96L33 236 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 VAT1Q99536 393 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 CINPQ9BW66 212 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 DDX47Q9H0S4 455 aaKnown RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 CHST8Q9H2A9 424 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 ACSS3Q9H6R3 686 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 ESRP2Q9H6T0 727 aaKnown RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 C7orf69Q9H7B7 122 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 FN3KRPQ9HA64 309 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 PDFQ9HBH1 243 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 FGF22Q9HCT0 170 aa4.99□□□□□ -1.61
FXN-205ENST00000498653 RRAGDQ9NQL2 400 aaPredicted RBP4.99□□□□□ -1.61
FXN-205ENST00000498653 RBM22Q9NW64 420 aaKnown RBP eCLIP4.99□□□□□ -1.614e-7■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms