RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SLC17A6Q9P2U8 582 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 TSR3Q9UJK0 312 aaKnown RBP14.77□□□□□ -0.05
NUP50-219ENST00000497960 PLCL2Q9UPR0 1127 aa14.77□□□□□ -0.05
NUP50-219ENST00000497960 FKBP9O95302 570 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 F7P08709 466 aaPredicted RBP14.76□□□□□ -0.05
NUP50-219ENST00000497960 MYBL2P10244 700 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 MAGP20916 626 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 AGXTP21549 392 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 PHBP35232 272 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 RORAP35398 523 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 VSNL1P62760 191 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 FRG1Q14331 258 aaKnown RBP14.76□□□□□ -0.05
NUP50-219ENST00000497960 GBX1Q14549 363 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 SF1Q15637 639 aaKnown RBP14.76□□□□□ -0.05
NUP50-219ENST00000497960 ERCC6LQ2NKX8 1250 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 DEFB110Q30KQ9 67 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 TLDC1Q6P9B6 456 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 SYTL1Q8IYJ3 562 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 DNAJC22Q8N4W6 341 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 EIF1ADQ8N9N8 165 aaKnown RBP14.76□□□□□ -0.05
NUP50-219ENST00000497960 RUFY1Q96T51 708 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 DPH2Q9BQC3 489 aaPredicted RBP14.76□□□□□ -0.05
NUP50-219ENST00000497960 PCMTD2Q9NV79 361 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 SPATA7Q9P0W8 599 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 FBXO5Q9UKT4 447 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 RUVBL2Q9Y230 463 aaKnown RBP14.76□□□□□ -0.05
NUP50-219ENST00000497960 COMMD10Q9Y6G5 202 aa14.76□□□□□ -0.05
NUP50-219ENST00000497960 TCRBV9S1A1TA0A576 114 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 C9J4A7 227 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 ZSCAN9O15535 394 aaPredicted RBP14.75□□□□□ -0.05
NUP50-219ENST00000497960 MATN4O95460 622 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 ACSL3O95573 720 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 RAB40ALP0C0E4 278 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 FAM153BP0C7A2 387 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 PLA2G2AP14555 144 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 MCM3P25205 808 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 GABRA4P48169 554 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 GPX6P59796 221 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 RPS18P62269 152 aaKnown RBP14.75□□□□□ -0.05
NUP50-219ENST00000497960 KLHL38Q2WGJ6 581 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 PTCHD3Q3KNS1 767 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 FAM153CQ494X1 144 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 ACSBG2Q5FVE4 666 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 C3orf62Q6ZUJ4 267 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 RELL1Q8IUW5 271 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 CNTN4Q8IWV2 1026 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 FAM20CQ8IXL6 584 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 LMNTD1Q8N9Z9 388 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 C2CD4AQ8NCU7 369 aaPredicted RBP14.75□□□□□ -0.05
NUP50-219ENST00000497960 THAP4Q8WY91 577 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 KCNJ9Q92806 393 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 C17orf62Q9BQA9 187 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 NLNQ9BYT8 704 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 SPRTNQ9H040 489 aaPredicted RBP14.75□□□□□ -0.05
NUP50-219ENST00000497960 LRRC4CQ9HCJ2 640 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 NSMCE4AQ9NXX6 385 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 KLHL42Q9P2K6 505 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 GALPQ9UBC7 116 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 SNX7Q9UNH6 387 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 SRPK3Q9UPE1 567 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 MAN2B2Q9Y2E5 1009 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 KLHL20Q9Y2M5 609 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 KCNMB2Q9Y691 235 aa14.75□□□□□ -0.05
NUP50-219ENST00000497960 SNRNP200O75643 2136 aaKnown RBP14.75□□□□□ -0.05
NUP50-219ENST00000497960 SLC28A2O43868 658 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 CATP04040 527 aaKnown RBP14.74□□□□□ -0.05
NUP50-219ENST00000497960 FURINP09958 794 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 CLCN7P51798 805 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 UGT8Q16880 541 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 CCSMST1Q4G0I0 132 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 ZC3H12BQ5HYM0 836 aaKnown RBP14.74□□□□□ -0.05
NUP50-219ENST00000497960 TEDDM1Q5T9Z0 273 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 LCN10Q6JVE6 187 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 FIGLAQ6QHK4 219 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 KIAA0408Q6ZU52 694 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 NEK10Q6ZWH5 1172 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 PRICKLE2Q7Z3G6 844 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 MCATQ8IVS2 390 aaKnown RBP14.74□□□□□ -0.05
NUP50-219ENST00000497960 CTAGE3PQ8IX95 158 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 ZNF655Q8N720 491 aaPredicted RBP14.74□□□□□ -0.05
NUP50-219ENST00000497960 ENDOVQ8N8Q3 282 aaKnown RBP14.74□□□□□ -0.05
NUP50-219ENST00000497960 OR9A1PQ8NGU1 263 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 C9orf43Q8TAL5 461 aaPredicted RBP14.74□□□□□ -0.05
NUP50-219ENST00000497960 HMGCLL1Q8TB92 370 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 PROKR1Q8TCW9 393 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 FBF1Q8TES7 1133 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.74□□□□□ -0.05
NUP50-219ENST00000497960 ZUFSPQ96AP4 578 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 NDC1Q9BTX1 674 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 TXLNGQ9NUQ3 528 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 EURLQ9NYK6 297 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 MOCS1Q9NZB8 636 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 TXNDC16Q9P2K2 825 aa14.74□□□□□ -0.05
NUP50-219ENST00000497960 CFAP46Q8IYW2 2715 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 HELZ2Q9BYK8 2649 aaKnown RBP14.73□□□□□ -0.05
NUP50-219ENST00000497960 ARHGEF33A8MVX0 844 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 MKRN2OSH3BPM6 223 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 HCRTR1O43613 425 aa14.73□□□□□ -0.05
NUP50-219ENST00000497960 PSIP1O75475 530 aaKnown RBP14.73□□□□□ -0.05
NUP50-219ENST00000497960 ENO3P13929 434 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms