RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 SHROOM3Q8TF72 1996 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 MYOFQ9NZM1 2061 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 NUP210Q8TEM1 1887 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 KIF26AQ9ULI4 1882 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 A0A0J9YYE9 177 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 IQANK1A0A1B0GTG1 560 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ANTXRLA6NF34 631 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TTC34A8MYJ7 566 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TRIM49D1C9J1S8 452 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 E9PLN8 166 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 PRPF4O43172 522 aaKnown RBP eCLIP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 SGTAO43765 313 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 RRP9O43818 475 aaKnown RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 SHOX2O60902 331 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 NDUFS2O75306 463 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 VAPBO95292 243 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 PIGNO95427 931 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 IGSF6O95976 241 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TRBC1P01850 177 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CD1AP06126 327 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ATP5BP06576 529 aaKnown RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CTSLP07711 333 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CHRM2P08172 466 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 INHBAP08476 426 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 SNRPAP09012 282 aaKnown RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 PIRTP0C851 137 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ITGB6P18564 788 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 C5AR1P21730 350 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CNTFP26441 200 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ATP5DP30049 168 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 GDI1P31150 447 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 GP5P40197 560 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 MDH1P40925 334 aaKnown RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CCNHP51946 323 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 LIMK2P53671 638 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CSE1LP55060 971 aaKnown RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 BCL2L1Q07817 233 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 DNAJC3Q13217 504 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 LAMB3Q13751 1172 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ENPP2Q13822 863 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 PTPRCAPQ14761 206 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TMED2Q15363 201 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ITPRIPL2Q3MIP1 535 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 HSP90AA5PQ58FG0 334 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ARMC12Q5T9G4 340 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 GRTP1Q5TC63 336 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 NEPROQ6NW34 567 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 MTSS1LQ765P7 747 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 GALNT7Q86SF2 657 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 AMIGO2Q86SJ2 522 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 KCNMB4Q86W47 210 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ZC3HC1Q86WB0 502 aaKnown RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CTAGE3PQ8IX95 158 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CNPY4Q8N129 248 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CPA6Q8N4T0 437 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ARFGAP2Q8N6H7 521 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 BANPQ8N9N5 519 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TERB1Q8NA31 727 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 PDPRQ8NCN5 879 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 LPCAT1Q8NF37 534 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TOR1AIP2Q8NFQ8 470 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 OR13C4Q8NGS5 318 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 OR6K2Q8NGY2 324 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 BLOC1S5Q8TDH9 187 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 HCAR2Q8TDS4 363 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 STYXQ8WUJ0 223 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 DDB2Q92466 427 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CDKL2Q92772 493 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 HDAC10Q969S8 669 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 MTBPQ96DY7 904 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CDKN2AIPNLQ96HQ2 116 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ZNF641Q96N77 438 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 MCCC1Q96RQ3 725 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 CPNE1Q99829 537 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 VKORC1Q9BQB6 163 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TRMT61BQ9BVS5 477 aaKnown RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ADGRE3Q9BY15 652 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TMEM245Q9H330 911 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 MFSD1Q9H3U5 465 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TRABDQ9H4I3 376 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ATP13A3Q9H7F0 1226 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TRPV5Q9NQA5 729 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 IARS2Q9NSE4 1012 aaKnown RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 C20orf96Q9NUD7 363 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 NLE1Q9NVX2 485 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 GTSE1Q9NYZ3 720 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 HACD3Q9P035 362 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 IL17CQ9P0M4 197 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 SENP1Q9P0U3 644 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 THAP10Q9P2Z0 257 aaPredicted RBP5.29□□□□□ -1.56
GGPS1-208ENST00000497327 TBK1Q9UHD2 729 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 PHTF1Q9UMS5 762 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 ARL5AQ9Y689 179 aa5.29□□□□□ -1.56
GGPS1-208ENST00000497327 A0A0U1RQS6 177 aa5.28□□□□□ -1.56
GGPS1-208ENST00000497327 TMEM120BA0PK00 339 aa5.28□□□□□ -1.56
GGPS1-208ENST00000497327 CCDC162PA2VCL2 907 aa5.28□□□□□ -1.56
GGPS1-208ENST00000497327 CAPN8A6NHC0 703 aa5.28□□□□□ -1.56
GGPS1-208ENST00000497327 SHISA7A6NL88 538 aa5.28□□□□□ -1.56
GGPS1-208ENST00000497327 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.28□□□□□ -1.56
GGPS1-208ENST00000497327 C2CD4DB7Z1M9 353 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms