RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 SLC38A9Q8NBW4 561 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 OR2L8Q8NGY9 312 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 GABPB2Q8TAK5 448 aaPredicted RBP7.55□□□□□ -1.2
SRRM1-220ENST00000496882 ANP32BQ92688 251 aaKnown RBP7.55□□□□□ -1.2
SRRM1-220ENST00000496882 RUFY1Q96T51 708 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 KIFC1Q9BW19 673 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 ING2Q9H160 280 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 EPN3Q9H201 632 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 AKIRIN1Q9H9L7 192 aaPredicted RBP7.55□□□□□ -1.2
SRRM1-220ENST00000496882 XAB2Q9HCS7 855 aaKnown RBP7.55□□□□□ -1.2
SRRM1-220ENST00000496882 TREX1Q9NSU2 369 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 SPHK1Q9NYA1 384 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 MARCH4Q9P2E8 410 aaPredicted RBP7.55□□□□□ -1.2
SRRM1-220ENST00000496882 SOX13Q9UN79 622 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 ZNF451Q9Y4E5 1061 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 PCDHGB7Q9Y5F8 929 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 FAM169AQ9Y6X4 670 aa7.55□□□□□ -1.2
SRRM1-220ENST00000496882 A0A1W2PNR3 127 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 SDR42E2A6NKP2 422 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 ZNF839A8K0R7 811 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PGRMC1O00264 195 aaKnown RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 DPM1O60762 260 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 DNAJB5O75953 348 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 SLCO2B1O94956 709 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 ESR1P03372 595 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 ERVK-10P10266 1014 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 NR1D1P20393 614 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 MAGP20916 626 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 ALAS2P22557 587 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PRR20EP86478 221 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PRR20CP86479 221 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PRR20DP86480 221 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PRR20BP86481 221 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PRR20AP86496 221 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 CHAF1BQ13112 559 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 IL10RAQ13651 578 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 DHX34Q14147 1143 aaKnown RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 SSPNQ14714 243 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 CYP2A13Q16696 494 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 ZNF789Q5FWF6 425 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 TCTE1Q5JU00 501 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 YOD1Q5VVQ6 348 aaPredicted RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 KIAA0930Q6ICG6 404 aaPredicted RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 CNSTQ6PJW8 725 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 CCDC137Q6PK04 289 aaKnown RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 CES3Q6UWW8 571 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 HPS6Q86YV9 775 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 VRK3Q8IV63 474 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 GALNT12Q8IXK2 581 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 C2orf73Q8N5S3 287 aaPredicted RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 ZBTB2Q8N680 514 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PRELID2Q8N945 189 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 CLEC1AQ8NC01 280 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 LKAAEAR1Q8TD35 194 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 CALML6Q8TD86 181 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 ZNF669Q96BR6 464 aaPredicted RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 MFSD3Q96ES6 412 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 VPS50Q96JG6 964 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 FER1L6-AS2Q96M78 137 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 IL17FQ96PD4 163 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 NRTNQ99748 197 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 SPRTNQ9H040 489 aaPredicted RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 P2RY12Q9H244 342 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 FAM60AQ9NP50 221 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 FAM114A2Q9NRY5 505 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 UTP6Q9NYH9 597 aaKnown RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 EURLQ9NYK6 297 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 SPATA7Q9P0W8 599 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 CIDEBQ9UHD4 219 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PTRH2Q9Y3E5 179 aaKnown RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PCDHGA9Q9Y5G4 932 aaKnown RBP7.54□□□□□ -1.2
SRRM1-220ENST00000496882 MAD1L1Q9Y6D9 718 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 ZNF462Q96JM2 2506 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 PIEZO2Q9H5I5 2752 aa7.54□□□□□ -1.2
SRRM1-220ENST00000496882 A0A1B0GX78 115 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 PABPN1LA6NDY0 278 aaKnown RBP7.53□□□□□ -1.2
SRRM1-220ENST00000496882 A6NL46 340 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 TTLL8A6PVC2 850 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 GOLGA8KD6RF30 607 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 GOLGA8TH3BQL2 631 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 ZNF185O15231 689 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 KIF5CO60282 957 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 PHF2O75151 1096 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 VPS4BO75351 444 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 VPS26AO75436 327 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 USP1O94782 785 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 CCNDBP1O95273 360 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 C1orf105O95561 183 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 CATP04040 527 aaKnown RBP7.53□□□□□ -1.2
SRRM1-220ENST00000496882 ALPPP05187 535 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 CBSLP0DN79 551 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 MLNP12872 115 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 PKMP14618 531 aaKnown RBP7.53□□□□□ -1.2
SRRM1-220ENST00000496882 ITGAXP20702 1163 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 ATP5DP30049 168 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 CMPK1P30085 196 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 PEBP1P30086 187 aaKnown RBP7.53□□□□□ -1.2
SRRM1-220ENST00000496882 RPA3P35244 121 aaPredicted RBP7.53□□□□□ -1.2
SRRM1-220ENST00000496882 CBSP35520 551 aa7.53□□□□□ -1.2
SRRM1-220ENST00000496882 COILP38432 576 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms