RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 CPPED1Q9BRF8 314 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 WRAP53Q9BUR4 548 aaKnown RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 SERHLQ9NQF3 203 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 SMPD3Q9NY59 655 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 STOX2Q9P2F5 926 aaPredicted RBP12.68□□□□□ -0.38
GARNL3-220ENST00000496711 PPT2Q9UMR5 302 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 INVSQ9Y283 1065 aa12.68□□□□□ -0.38
GARNL3-220ENST00000496711 A0A1B0GTW7 788 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 ELOVL7A1L3X0 281 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 CLGNO14967 610 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 CLOCKO15516 846 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 SPINT1O43278 529 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 DEAF1O75398 565 aaPredicted RBP12.67□□□□□ -0.38
GARNL3-220ENST00000496711 SCELO95171 688 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 NELFEP18615 380 aaKnown RBP12.67□□□□□ -0.38
GARNL3-220ENST00000496711 TACR1P25103 407 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 RPS9P46781 194 aaKnown RBP12.67□□□□□ -0.38
GARNL3-220ENST00000496711 NRIP1P48552 1158 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 PHC1P78364 1004 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 SLC36A3Q495N2 470 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 XKR6Q5GH73 641 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 AGTRAPQ6RW13 159 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 ETFBKMTQ8IXQ9 262 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 MICU2Q8IYU8 434 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 SLC22A15Q8IZD6 547 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 OR52E4Q8NGH9 312 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 HM13Q8TCT9 377 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
GARNL3-220ENST00000496711 NXPE3Q969Y0 559 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 COQ10AQ96MF6 247 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 UGT2B28Q9BY64 529 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 CAAP1Q9H8G2 361 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 CD320Q9NPF0 282 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 OLAHQ9NV23 265 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 PCDHB14Q9Y5E9 798 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 COMMD3-BMI1R4GMX3 469 aa12.67□□□□□ -0.38
GARNL3-220ENST00000496711 E7EQ34 232 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 CXCR6O00574 342 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 HOXB9P17482 250 aaPredicted RBP12.66□□□□□ -0.38
GARNL3-220ENST00000496711 CD22P20273 847 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 ITGB7P26010 798 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 PBLDP30039 288 aaPredicted RBP12.66□□□□□ -0.38
GARNL3-220ENST00000496711 HNRNPFP52597 415 aaKnown RBP12.66□□□□□ -0.38
GARNL3-220ENST00000496711 DPY19L1Q2PZI1 675 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 FNDC3BQ53EP0 1204 aaKnown RBP12.66□□□□□ -0.38
GARNL3-220ENST00000496711 GRHL2Q6ISB3 625 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 NOXRED1Q6NXP6 359 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 TMEM220Q6QAJ8 160 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 RBM44Q6ZP01 1051 aaKnown RBP12.66□□□□□ -0.38
GARNL3-220ENST00000496711 GPR180Q86V85 440 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 LILRA3Q8N6C8 439 aaPredicted RBP12.66□□□□□ -0.38
GARNL3-220ENST00000496711 WDR20Q8TBZ3 569 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 NELL1Q92832 810 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 FAM162AQ96A26 154 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 MED8Q96G25 268 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 FOPNLQ96NB1 174 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 HHIPQ96QV1 700 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 TBCDQ9BTW9 1192 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 TRIM4Q9C037 500 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 ZCCHC2Q9C0B9 1178 aaKnown RBP12.66□□□□□ -0.38
GARNL3-220ENST00000496711 KAT8Q9H7Z6 458 aaKnown RBP12.66□□□□□ -0.38
GARNL3-220ENST00000496711 SLC6A13Q9NSD5 602 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 PCM1Q15154 2024 aa12.66□□□□□ -0.38
GARNL3-220ENST00000496711 EDDM13A0A1B0GTR0 161 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PRRT4C9JH25 899 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PRSS23O95084 383 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 LRATO95237 230 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 NFATC1O95644 943 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 RB1P06400 928 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 GNAO1P09471 354 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 IMPA1P29218 277 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 CAPGP40121 348 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 HNF4AP41235 474 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 VIPR2P41587 438 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 ELP6Q0PNE2 266 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 NAE1Q13564 534 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 DOC2AQ14183 400 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PGS1Q32NB8 556 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 CCSMST1Q4G0I0 132 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 KCTD21Q4G0X4 260 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 BCL7AQ4VC05 210 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 GCNT7Q6ZNI0 430 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 CALHM3Q86XJ0 350 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 SYT12Q8IV01 421 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 PHACTR4Q8IZ21 702 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 RNF175Q8N4F7 328 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 VN1R2Q8NFZ6 395 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 OR56A3Q8NH54 315 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 FBXO30Q8TB52 745 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 MAGEE2Q8TD90 523 aaPredicted RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 ZFAND2BQ8WV99 257 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 CYGBQ8WWM9 190 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 OR8D1Q8WZ84 308 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 NCLNQ969V3 563 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 DGCR14Q96DF8 476 aaKnown RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 NUS1Q96E22 293 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 FAM120BQ96EK7 910 aaKnown RBP12.65□□□□□ -0.38
GARNL3-220ENST00000496711 SLC47A1Q96FL8 570 aa12.65□□□□□ -0.38
GARNL3-220ENST00000496711 INPP5KQ9BT40 448 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms